B1XN43 (B1XN43_SYNP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase 1 HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase 1 HAMAP MF_00484

Gene names

Name:	glgA1 HAMAP MF_00484 EMBL ACA99523.1
Ordered Locus Names:	SYNPCC7002_A1532

Organism

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP]

Taxonomic identifier

32049 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	478 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
Molecular function	Glycosyltransferase HAMAP MF_00484 SAAS SAAS011835 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	15	1	ADP-glucose By similarity HAMAP MF_00484

Sequences

	Sequence		Length	Mass (Da)
	B1XN43 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: DB5B55B6F1EB1219	FASTA	478	54,860
	10 20 30 40 50 60 MRILFVSAEA APIAKAGGMG DVVGSLPKVL RQLGHDARIF LPYYGFLNDK LDIPAEPVWW 70 80 90 100 110 120 GSAMFNTFAV YETVLPNTDV PLYLFGHPAF DGRHIYGGQD EFWRFTFFAN GAAEFMWNHW 130 140 150 160 170 180 KPQIAHCHDW HTGMIPVWMH QSPDISTVFT IHNLAYQGPW RGFLERNTWC PWYMDGDNVM 190 200 210 220 230 240 ASALMFADQV NTVSPTYAQQ IQTKVYGEKL EGLLSWISGK SRGIVNGIDV ELYNPSNDQA 250 260 270 280 290 300 LVKQFSTTNL EDRAANKVII QEETGLEVNS KAFLMAMVTR LVEQKGIDLL LNILEQFMAY 310 320 330 340 350 360 TDAQLIILGT GDRHYETQLW QTAYRFKGRM SVQLLYNDAL SRRIYAGSDV FLMPSRFEPC 370 380 390 400 410 420 GISQMMAMRY GSVPIVRRTG GLVDTVSFHD PIHQTGTGFS FDRYEPLDMY TCMVRAWESF 430 440 450 460 470 RYKKDWAELQ RRGMSHDFSW YKSAGEYLKM YRQSIKEAPE LTTDEAEKIT YLVKKHAI

References

[1]

"Complete sequence of Synechococcus sp. PCC 7002." Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000951 Genomic DNA. Translation: ACA99523.1.
RefSeq	YP_001734779.1. NC_010475.1.
3D structure databases
ProteinModelPortal	B1XN43.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XN43.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6055118.
GenomeReviews	Gene locus SYNPCC7002_A1532 in contig CP000951_GR.
KEGG	syp:SYNPCC7002_A1532.
PATRIC	23817670. VBISynSp37135_1779.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	PIVHEIG.
PhylomeDB	B1XN43.
ProtClustDB	PRK00654.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1XN43_SYNP2

Accession

Primary (citable) accession number: B1XN43

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)