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B1XMM6 (B1XMM6_SYNP2) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SYNPCC7002_A2771 EMBL ACB00745.1
OrganismSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP] EMBL ACB00745.1
Taxonomic identifier32049 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length454 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding128 – 1314NADP
Nucleotide binding154 – 1574NADP
Nucleotide binding206 – 2072NADP
Nucleotide binding228 – 2303NADP
Nucleotide binding359 – 3613NADP
Region154 – 1574Phosphate binding PDB 4IT9

Sites

Binding site1391NADP
Binding site2131NADP PDB 4ITB
Binding site2621NADP PDB 4ITA

Sequences

Sequence LengthMass (Da)Tools
B1XMM6 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 775446BD8C9D6CB6

FASTA45449,019
        10         20         30         40         50         60 
MAIATINPTT GEICQRFKAL TPAEIDAKLA KAQEAFQAYR RTSFSQRRQW LENAAAILER 

        70         80         90        100        110        120 
DTSKFAEIMT TEMGKTHQSA IAEAEKSALV CRYYAEHGEQ FLANEYTETQ ATESYVCYQP 

       130        140        150        160        170        180 
LGILLAVMPW NFPFWQVFRF AAPALMAGNV AVLKHASNVP QCALAVEAIL EAAGFPEGVF 

       190        200        210        220        230        240 
QTLLIGASQV EQVIKDPRVK AATLTGSEPA GASLASLAGQ EIKPTLLELG GSDPFVVFPS 

       250        260        270        280        290        300 
ADLDEAVEVG TVARTMNNGQ SCIAAKRFIL HEAIAAEFLE KLHLKFASLK IGDPMAPETD 

       310        320        330        340        350        360 
IGPLATEGIL QDISRQVDQA VAAGAKILLG GRPLDRAGYF YPPTILTEIP PGAKILQEEL 

       370        380        390        400        410        420 
FAPVAMVFTV KDLDQAIALA NDIPFGLGAS AWTNDPAEQQ RFIQELDAGA VFINGMVKSD 

       430        440        450 
PRLPFGGTKR SGYGRELGLA GIRTFVNAKT VWLK 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Synechococcus sp. PCC 7002."
Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27264 / PCC 7002 / PR-6.
[2]"Structural basis for a cofactor-dependent oxidation protection and catalysis of cyanobacterial succinic semialdehyde dehydrogenase."
Park J., Rhee S.
J. Biol. Chem. 288:15760-15770(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) IN COMPLEX WITH NADP AND PHOSPHATE.
[3]"Structural basis for cofactor and substrate selection by cyanobacterium succinic semialdehyde dehydrogenase."
Yuan Z., Yin B., Wei D., Yuan Y.R.
J. Struct. Biol. 182:125-135(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.69 ANGSTROMS) IN COMPLEX WITH NADP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000951 Genomic DNA. Translation: ACB00745.1.
RefSeqYP_001736000.1. NC_010475.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3VZ1X-ray2.10A/B1-454[»]
3VZ2X-ray2.50A/B1-454[»]
3VZ3X-ray1.69A/B1-454[»]
4IT9X-ray1.70A/B1-454[»]
4ITAX-ray1.40A/B1-454[»]
4ITBX-ray1.40A/B1-454[»]
ProteinModelPortalB1XMM6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING32049.SYNPCC7002_A2771.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB00745; ACB00745; SYNPCC7002_A2771.
GeneID6056067.
KEGGsyp:SYNPCC7002_A2771.
PATRIC23820212. VBISynSp37135_3032.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000271513.
KOK00135.
OMARLNNTGQ.
OrthoDBEOG6BS8QW.

Enzyme and pathway databases

BioCycMetaCyc:MONOMER-17041.
SSP32049:GKF7-2772-MONOMER.

Family and domain databases

Gene3D3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XMM6_SYNP2
AccessionPrimary (citable) accession number: B1XMM6
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: February 19, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)