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B1XMM6

- B1XMM6_SYNP2

UniProt

B1XMM6 - B1XMM6_SYNP2

Protein
Submitted name:

Succinate-semialdehyde dehydrogenase

Gene

SYNPCC7002_A2771

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei139 – 1391NADPImported
    Binding sitei213 – 2131NADPImported
    Binding sitei262 – 2621NADPImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi128 – 1314NADPImported
    Nucleotide bindingi154 – 1574NADPImported
    Nucleotide bindingi206 – 2072NADPImported
    Nucleotide bindingi228 – 2303NADPImported
    Nucleotide bindingi359 – 3613NADPImported

    GO - Molecular functioni

    1. nucleotide binding Source: UniProtKB-KW
    2. oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Source: InterPro

    Keywords - Ligandi

    NADPImported, Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciMetaCyc:MONOMER-17041.
    SSP32049:GKF7-2772-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Succinate-semialdehyde dehydrogenaseImported
    Gene namesi
    Ordered Locus Names:SYNPCC7002_A2771Imported
    OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
    Taxonomic identifieri32049 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001688: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi32049.SYNPCC7002_A2771.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3VZ1X-ray2.10A/B1-454[»]
    3VZ2X-ray2.50A/B1-454[»]
    3VZ3X-ray1.69A/B1-454[»]
    4IT9X-ray1.70A/B1-454[»]
    4ITAX-ray1.40A/B1-454[»]
    4ITBX-ray1.40A/B1-454[»]
    ProteinModelPortaliB1XMM6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000271513.
    KOiK00135.
    OMAiVLTHITR.
    OrthoDBiEOG6BS8QW.

    Family and domain databases

    Gene3Di3.40.309.10. 1 hit.
    3.40.605.10. 1 hit.
    InterProiIPR016161. Ald_DH/histidinol_DH.
    IPR016163. Ald_DH_C.
    IPR016162. Ald_DH_N.
    IPR015590. Aldehyde_DH_dom.
    [Graphical view]
    PfamiPF00171. Aldedh. 1 hit.
    [Graphical view]
    SUPFAMiSSF53720. SSF53720. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B1XMM6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAIATINPTT GEICQRFKAL TPAEIDAKLA KAQEAFQAYR RTSFSQRRQW    50
    LENAAAILER DTSKFAEIMT TEMGKTHQSA IAEAEKSALV CRYYAEHGEQ 100
    FLANEYTETQ ATESYVCYQP LGILLAVMPW NFPFWQVFRF AAPALMAGNV 150
    AVLKHASNVP QCALAVEAIL EAAGFPEGVF QTLLIGASQV EQVIKDPRVK 200
    AATLTGSEPA GASLASLAGQ EIKPTLLELG GSDPFVVFPS ADLDEAVEVG 250
    TVARTMNNGQ SCIAAKRFIL HEAIAAEFLE KLHLKFASLK IGDPMAPETD 300
    IGPLATEGIL QDISRQVDQA VAAGAKILLG GRPLDRAGYF YPPTILTEIP 350
    PGAKILQEEL FAPVAMVFTV KDLDQAIALA NDIPFGLGAS AWTNDPAEQQ 400
    RFIQELDAGA VFINGMVKSD PRLPFGGTKR SGYGRELGLA GIRTFVNAKT 450
    VWLK 454
    Length:454
    Mass (Da):49,019
    Last modified:May 20, 2008 - v1
    Checksum:i775446BD8C9D6CB6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000951 Genomic DNA. Translation: ACB00745.1.
    RefSeqiWP_012308363.1. NC_010475.1.
    YP_001736000.1. NC_010475.1.

    Genome annotation databases

    EnsemblBacteriaiACB00745; ACB00745; SYNPCC7002_A2771.
    GeneIDi6056067.
    KEGGisyp:SYNPCC7002_A2771.
    PATRICi23820212. VBISynSp37135_3032.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000951 Genomic DNA. Translation: ACB00745.1 .
    RefSeqi WP_012308363.1. NC_010475.1.
    YP_001736000.1. NC_010475.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3VZ1 X-ray 2.10 A/B 1-454 [» ]
    3VZ2 X-ray 2.50 A/B 1-454 [» ]
    3VZ3 X-ray 1.69 A/B 1-454 [» ]
    4IT9 X-ray 1.70 A/B 1-454 [» ]
    4ITA X-ray 1.40 A/B 1-454 [» ]
    4ITB X-ray 1.40 A/B 1-454 [» ]
    ProteinModelPortali B1XMM6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 32049.SYNPCC7002_A2771.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB00745 ; ACB00745 ; SYNPCC7002_A2771 .
    GeneIDi 6056067.
    KEGGi syp:SYNPCC7002_A2771.
    PATRICi 23820212. VBISynSp37135_3032.

    Phylogenomic databases

    HOGENOMi HOG000271513.
    KOi K00135.
    OMAi VLTHITR.
    OrthoDBi EOG6BS8QW.

    Enzyme and pathway databases

    BioCyci MetaCyc:MONOMER-17041.
    SSP32049:GKF7-2772-MONOMER.

    Family and domain databases

    Gene3Di 3.40.309.10. 1 hit.
    3.40.605.10. 1 hit.
    InterProi IPR016161. Ald_DH/histidinol_DH.
    IPR016163. Ald_DH_C.
    IPR016162. Ald_DH_N.
    IPR015590. Aldehyde_DH_dom.
    [Graphical view ]
    Pfami PF00171. Aldedh. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53720. SSF53720. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Synechococcus sp. PCC 7002."
      Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
      Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27264 / PCC 7002 / PR-6Imported.
    2. "Structural basis for a cofactor-dependent oxidation protection and catalysis of cyanobacterial succinic semialdehyde dehydrogenase."
      Park J., Rhee S.
      J. Biol. Chem. 288:15760-15770(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) IN COMPLEX WITH NADP.
    3. "Structural basis for cofactor and substrate selection by cyanobacterium succinic semialdehyde dehydrogenase."
      Yuan Z., Yin B., Wei D., Yuan Y.R.
      J. Struct. Biol. 182:125-135(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.69 ANGSTROMS) IN COMPLEX WITH NADP.

    Entry informationi

    Entry nameiB1XMM6_SYNP2
    AccessioniPrimary (citable) accession number: B1XMM6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3