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Protein
Submitted name:

Sensory box/GGDEF domain/EAL domain protein

Gene

SYNPCC7002_A2587

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP32049:GKF7-2588-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sensory box/GGDEF domain/EAL domain proteinImported
Gene namesi
Ordered Locus Names:SYNPCC7002_A2587Imported
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001688 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A2587.

Structurei

3D structure databases

ProteinModelPortaliB1XL77.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5001.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom-like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1XL77-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYQSLAALCA ALMLTGIVYV LVKHDQKIAM RQQDYRYIIF GCILLALGRW
60 70 80 90 100
LSFLQFSQYL GTQWQSLGTV WQFGERFISE GVGLIFVGVG LVRWLPTLTA
110 120 130 140 150
FQRRASAYRQ TSEALASERN ILQGLFNSLQ GALFVCDGAG NFIRWNRFYQ
160 170 180 190 200
EVLGFSDAEM SHLKAIETVV PEDREFVQQQ LLEVFSQGYA EGEFRVRTKQ
210 220 230 240 250
GQTLRLYGFA SRVELDLDQN ASGFTGIAID ISALKQVEAE LRRSQRSLQM
260 270 280 290 300
HNCFLTLAHA LTQRLHGSLE IEDIARETTT TLHQYYGETC IGFYLLEGAT
310 320 330 340 350
FEDGLLKLQS HAGFSSERRV ALNQLTASHR LFRYALQDKT LQILDAAELA
360 370 380 390 400
CFCDDLSPQS VALSNAAKVL TIPLIFHEQQ FGLLLMLFQE DKTLASYEID
410 420 430 440 450
TLRALGQSIS LAIANAHHFK ELRYQARYDS LTTIGNRNLF HDTIQEWLNA
460 470 480 490 500
PSLGYELIIV MLIDLDRFKD LNDTLGHKLG NTFLQQIALR LLSALSPYQG
510 520 530 540 550
IVCRLGGDEF AVACPMMHSE WEEACQHAVE LADILQAAIK QPFVTAGNVI
560 570 580 590 600
HITASLGIAM FPNHGTDSHA ALRSAEVAMY AAKQKRTAYE IYHEDIDHYT
610 620 630 640 650
PRRLAILSSL GKPSARQQFF LCYQPKFDLR QKRLIGVEAL ARWHHPTFGL
660 670 680 690 700
ISPAEFVPLA EQSDAIHALT YWIWEEAFQQ KKAWQNQGLD LAIALNLSAC
710 720 730 740 750
SLLDPNCLTT FESLLQQYEI IPAQVELEIT ETALMSDPRY ALELLQCFAN
760 770 780 790 800
LGVHLSIDDF GTGYSSLSYL QRFPVHALKI DQSFVVDMLT NEQSLVIVRS
810 820 830 840 850
TINLAHSLGL EVVAEGVENQ AILDLLKEMG CDIAQGYFLG RPQRAEQVHR
860
FSAEGLKRVV
Length:860
Mass (Da):96,883
Last modified:May 20, 2008 - v1
Checksum:i769B6EB1827A873E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACB00564.1.

Genome annotation databases

EnsemblBacteriaiACB00564; ACB00564; SYNPCC7002_A2587.
KEGGisyp:SYNPCC7002_A2587.
PATRICi23819838. VBISynSp37135_2848.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACB00564.1.

3D structure databases

ProteinModelPortaliB1XL77.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A2587.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB00564; ACB00564; SYNPCC7002_A2587.
KEGGisyp:SYNPCC7002_A2587.
PATRICi23819838. VBISynSp37135_2848.

Phylogenomic databases

eggNOGiCOG5001.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSSP32049:GKF7-2588-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom-like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Synechococcus sp. PCC 7002."
    Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27264 / PCC 7002 / PR-6Imported.

Entry informationi

Entry nameiB1XL77_SYNP2
AccessioniPrimary (citable) accession number: B1XL77
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: July 22, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.