B1XL11 (RPIA_SYNP2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	SYNPCC7002_A1269

Organism

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP]

Taxonomic identifier

32049 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	233 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 233	233	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000097701

Sequences

	Sequence		Length	Mass (Da)
	B1XL11 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 3F625EDAF6B9E340	FASTA	233	24,498
	10 20 30 40 50 60 MDAVTVMKQE VGKVAAALVQ SNSVVGLGTG STTAYAIQYI GERLAAGELE NIVGIPTSFQ 70 80 90 100 110 120 AEVLAKQYKI PLSSLDAVDH IDVAIDGADE VDPQKNLIKG GGAAHTREKV VDALANKFVV 130 140 150 160 170 180 VVDSGKLVDR LGSTFLLPVE VIPMAITPVM RQLEALGGKP ELRMGVKKAG PVVTDEGNLV 190 200 210 220 230 VDLKFAGIDD PATLEQKINN IPGVLENGLF VGVADVILVG EIIDGQPRVR EIQ

References

[1]

"Complete sequence of Synechococcus sp. PCC 7002." Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27264 / PCC 7002 / PR-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000951 Genomic DNA. Translation: ACA99266.1.
RefSeq	YP_001734522.1. NC_010475.1.
3D structure databases
ProteinModelPortal	B1XL11.
SMR	B1XL11. Positions 5-221.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XL11.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6055621.
GenomeReviews	Gene locus SYNPCC7002_A1269 in contig CP000951_GR.
KEGG	syp:SYNPCC7002_A1269.
PATRIC	23817102. VBISynSp37135_1501.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG515603.
OMA	IPMAITP.
PhylomeDB	B1XL11.
ProtClustDB	PRK00702.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_SYNP2

Accession

Primary (citable) accession number: B1XL11

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 24, 2009
Last sequence update:	May 20, 2008
Last modified:	January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program