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Protein
Submitted name:

Two-component response regulator (ABC transporter) / (GGDEF domain protein)

Gene

SYNPCC7002_A2461

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP32049:GKF7-2462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Two-component response regulator (ABC transporter) / (GGDEF domain protein)Imported
Gene namesi
Ordered Locus Names:SYNPCC7002_A2461Imported
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001688 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A2461.

Structurei

3D structure databases

ProteinModelPortaliB1XK84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0834.
HOGENOMiHOG000054921.
OMAiMAVERNE.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR001638. Solute-binding_3/MltF_N.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00062. PBPb. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1XK84-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKSTVLLAL GLAAMLSGTE AIAQNQPAKT ITVGVYQNDP KVFIDSGGRA
60 70 80 90 100
RGFWVDITSD IGRVENWAVT YVPCEWNQCL QQIEQGQLDL MVDVAYSDTR
110 120 130 140 150
DEVFDFNTII VLSSWSQIYA RRGVYLETIL DLDQRRVSIL ASGIQQEVLR
160 170 180 190 200
ERIKAYGIQP ELVPIDSYPG MFEQLETGEV DAAIVNNFFG NKFSPDYPVN
210 220 230 240 250
KTNILFNPAR LHYVVPEGDP KQLLPGIDRQ MSRLLQDRDS VYYQAIAQWL
260 270 280 290 300
EPPETFNWLS LQNFFFSLIV YLPFLFLGWF ILRNYSLKKE IKRRNQIETN
310 320 330 340 350
LLESQQRYAN LANTVSIGIF RTNLRHECIY VNDYYCKLLA IQPEEALHKG
360 370 380 390 400
WLEKVYPDDI DYVREQWLKS ITNQELFTLE YRFQRSDGSI LWVYGQGTAE
410 420 430 440 450
LDSKGEPQGY VATITDISTR IKMEQQLKHD ALHDRLTGLA NRNLLIERLN
460 470 480 490 500
LALKRYKRYP IHEFAALFLD LDNFKVVNDS LGHVVGDELL IEVAHLLKSF
510 520 530 540 550
IRDTDVAARL GGDEFVILLE EIHGVEDAVH IADRILNALN MPFQISNYGV
560 570 580 590 600
FITTSIGIII GDSRHESAQD LLRDADIAMY RAKQNGKSQY AIFDPQMHLQ
610 620 630 640 650
AMQRLQLEGE IRSAIEEKQF VLYYQPIINL EQGNIEGFEA LIRWQHPQRG
660 670 680 690 700
LLSPYEFIDV AEETGLIIPL GEWILDAACR QLFEWQQAFK TPLKVHVNLS
710 720 730 740 750
VKQLQDSLLF SLDRLLERYP VFPNTLGLEI TESMLIQNID ITCRLLNQIR
760 770 780 790 800
LKGVFISVDD FGTGYSCLSY LHQLPIDALK IDRSFVNISE LNDRNRVIAE
810 820 830 840 850
SILALSKSIG IKTVAEGIET KQQYQWLKSQ DCQFGQGYLF SRPVSLDQAT
860
DLLQGHSFEV LEKLRSSS
Length:868
Mass (Da):99,589
Last modified:May 20, 2008 - v1
Checksum:iB2FD0FB04CA7BA9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACB00439.1.
RefSeqiWP_012308057.1. NC_010475.1.
YP_001735694.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACB00439; ACB00439; SYNPCC7002_A2461.
KEGGisyp:SYNPCC7002_A2461.
PATRICi23819572. VBISynSp37135_2716.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACB00439.1.
RefSeqiWP_012308057.1. NC_010475.1.
YP_001735694.1. NC_010475.1.

3D structure databases

ProteinModelPortaliB1XK84.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A2461.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB00439; ACB00439; SYNPCC7002_A2461.
KEGGisyp:SYNPCC7002_A2461.
PATRICi23819572. VBISynSp37135_2716.

Phylogenomic databases

eggNOGiCOG0834.
HOGENOMiHOG000054921.
OMAiMAVERNE.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSSP32049:GKF7-2462-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR001638. Solute-binding_3/MltF_N.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00062. PBPb. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Synechococcus sp. PCC 7002."
    Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27264 / PCC 7002 / PR-6Imported.

Entry informationi

Entry nameiB1XK84_SYNP2
AccessioniPrimary (citable) accession number: B1XK84
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: June 24, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.