Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Two-component response regulator (ABC transporter) / (GGDEF domain protein)

Gene

SYNPCC7002_A2461

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP32049:GKF7-2462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Two-component response regulator (ABC transporter) / (GGDEF domain protein)Imported
Gene namesi
Ordered Locus Names:SYNPCC7002_A2461Imported
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesSynechococcaceaeSynechococcus
Proteomesi
  • UP000001688 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei264 – 282HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500277012124 – 868Sequence analysisAdd BLAST845

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A2461.

Structurei

3D structure databases

ProteinModelPortaliB1XK84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini304 – 375PAS (PER-ARNT-SIM)InterPro annotationAdd BLAST72
Domaini377 – 429PAC (PAS-associated C-terminal)InterPro annotationAdd BLAST53
Domaini462 – 595GGDEFInterPro annotationAdd BLAST134
Domaini604 – 857EALInterPro annotationAdd BLAST254

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili287 – 314Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
ENOG410XNMH. LUCA.
HOGENOMiHOG000054921.
OMAiMAVERNE.
OrthoDBiPOG091H049G.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR001638. Solute-binding_3/MltF_N.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
PF00497. SBP_bac_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00062. PBPb. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1XK84-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKSTVLLAL GLAAMLSGTE AIAQNQPAKT ITVGVYQNDP KVFIDSGGRA
60 70 80 90 100
RGFWVDITSD IGRVENWAVT YVPCEWNQCL QQIEQGQLDL MVDVAYSDTR
110 120 130 140 150
DEVFDFNTII VLSSWSQIYA RRGVYLETIL DLDQRRVSIL ASGIQQEVLR
160 170 180 190 200
ERIKAYGIQP ELVPIDSYPG MFEQLETGEV DAAIVNNFFG NKFSPDYPVN
210 220 230 240 250
KTNILFNPAR LHYVVPEGDP KQLLPGIDRQ MSRLLQDRDS VYYQAIAQWL
260 270 280 290 300
EPPETFNWLS LQNFFFSLIV YLPFLFLGWF ILRNYSLKKE IKRRNQIETN
310 320 330 340 350
LLESQQRYAN LANTVSIGIF RTNLRHECIY VNDYYCKLLA IQPEEALHKG
360 370 380 390 400
WLEKVYPDDI DYVREQWLKS ITNQELFTLE YRFQRSDGSI LWVYGQGTAE
410 420 430 440 450
LDSKGEPQGY VATITDISTR IKMEQQLKHD ALHDRLTGLA NRNLLIERLN
460 470 480 490 500
LALKRYKRYP IHEFAALFLD LDNFKVVNDS LGHVVGDELL IEVAHLLKSF
510 520 530 540 550
IRDTDVAARL GGDEFVILLE EIHGVEDAVH IADRILNALN MPFQISNYGV
560 570 580 590 600
FITTSIGIII GDSRHESAQD LLRDADIAMY RAKQNGKSQY AIFDPQMHLQ
610 620 630 640 650
AMQRLQLEGE IRSAIEEKQF VLYYQPIINL EQGNIEGFEA LIRWQHPQRG
660 670 680 690 700
LLSPYEFIDV AEETGLIIPL GEWILDAACR QLFEWQQAFK TPLKVHVNLS
710 720 730 740 750
VKQLQDSLLF SLDRLLERYP VFPNTLGLEI TESMLIQNID ITCRLLNQIR
760 770 780 790 800
LKGVFISVDD FGTGYSCLSY LHQLPIDALK IDRSFVNISE LNDRNRVIAE
810 820 830 840 850
SILALSKSIG IKTVAEGIET KQQYQWLKSQ DCQFGQGYLF SRPVSLDQAT
860
DLLQGHSFEV LEKLRSSS
Length:868
Mass (Da):99,589
Last modified:May 20, 2008 - v1
Checksum:iB2FD0FB04CA7BA9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACB00439.1.
RefSeqiWP_012308057.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACB00439; ACB00439; SYNPCC7002_A2461.
KEGGisyp:SYNPCC7002_A2461.
PATRICi23819572. VBISynSp37135_2716.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACB00439.1.
RefSeqiWP_012308057.1. NC_010475.1.

3D structure databases

ProteinModelPortaliB1XK84.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A2461.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB00439; ACB00439; SYNPCC7002_A2461.
KEGGisyp:SYNPCC7002_A2461.
PATRICi23819572. VBISynSp37135_2716.

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
ENOG410XNMH. LUCA.
HOGENOMiHOG000054921.
OMAiMAVERNE.
OrthoDBiPOG091H049G.

Enzyme and pathway databases

BioCyciSSP32049:GKF7-2462-MONOMER.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013655. PAS_fold_3.
IPR001638. Solute-binding_3/MltF_N.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF08447. PAS_3. 1 hit.
PF00497. SBP_bac_3. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
SM00062. PBPb. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1XK84_SYNP2
AccessioniPrimary (citable) accession number: B1XK84
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 2, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.