B1XJM9 (B1XJM9_SYNP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
UPF0102 protein SYNPCC7002_A2337 HAMAP MF_00048

Gene names

Ordered Locus Names:

SYNPCC7002_A2337

Organism

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP]

Taxonomic identifier

32049 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	140 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0102 family. HAMAP MF_00048

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nuclease activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1XJM9 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 1212505ADAC0934F	FASTA	140	15,906
	10 20 30 40 50 60 MADTPSPEKL AALAVGEQGE LFVQQHLKSQ DWQIVATRWR CRWGELDLVA FHAQTKILAF 70 80 90 100 110 120 VEVKTRQQHS LDYQGLLAIT PSKQRKTIRA AMQFLSKFPQ YETYGCRFDV ALVTYSKTAT 130 140 FPQGFRLATY LEGAFEADAS

References

[1]

"Complete sequence of Synechococcus sp. PCC 7002." Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000951 Genomic DNA. Translation: ACB00315.1.
RefSeq	YP_001735570.1. NC_010475.1.
3D structure databases
ProteinModelPortal	B1XJM9.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XJM9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6056941.
GenomeReviews	Gene locus SYNPCC7002_A2337 in contig CP000951_GR.
KEGG	syp:SYNPCC7002_A2337.
PATRIC	23819304. VBISynSp37135_2582.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG710155.
OMA	IVATRWR.
PhylomeDB	B1XJM9.
ProtClustDB	PRK12497.
Family and domain databases
HAMAP	MF_00048. UPF0102. [Tree]
InterPro	IPR011856. Endonuc_TnsA/Hjc/tRNA. IPR011335. Restrct_endonuc_II-like. IPR003509. UPF0102. [Graphical view]
Gene3D	G3DSA:3.40.1350.10. Endonuc_TnsA/Hjc/tRNA. 1 hit.
KO	K07460.
Pfam	PF02021. UPF0102. 1 hit. [Graphical view]
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit.
TIGRFAMs	TIGR00252. TIGR00252. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1XJM9_SYNP2

Accession

Primary (citable) accession number: B1XJM9

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)