B1XJI3 (RL17_SYNP2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17

Gene names

Name:	rplQ
Synonyms:	rpl17
Ordered Locus Names:	SYNPCC7002_A1041

Organism

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP]

Taxonomic identifier

32049 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity.
Sequence similarities	Belongs to the ribosomal protein L17P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 116	116	50S ribosomal protein L17 HAMAP MF_01368		PRO_1000144495

Sequences

	Sequence		Length	Mass (Da)
	B1XJI3 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 800DA1FDA766425A	FASTA	116	13,145
	10 20 30 40 50 60 MRHGCRVPEL GRPADQRKAL LRALTTQLIR HGQVKTTKAR AKAVRSEVDR MITLAKDGSL 70 80 90 100 110 AARRRALGYM YDKDLVHALF AQAKDRYGDR QGGYSRVVRT VRRRGDNAEM AIIELV

References

[1]

"Complete sequence of Synechococcus sp. PCC 7002." Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27264 / PCC 7002 / PR-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000951 Genomic DNA. Translation: ACA99043.1.
RefSeq	YP_001734299.1. NC_010475.1.
3D structure databases
ProteinModelPortal	B1XJI3.
SMR	B1XJI3. Positions 1-116.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XJI3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6057779.
GenomeReviews	Gene locus SYNPCC7002_A1041 in contig CP000951_GR.
KEGG	syp:SYNPCC7002_A1041.
PATRIC	23816604. VBISynSp37135_1257.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG704211.
OMA	FSELGPR.
PhylomeDB	B1XJI3.
ProtClustDB	PRK05591.
Family and domain databases
HAMAP	MF_01368. Ribosomal_L17. [Tree]
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
Gene3D	G3DSA:3.90.1030.10. Ribosomal_L17. 1 hit.
KO	K02879.
PANTHER	PTHR14413. Ribosomal_L17. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL17_SYNP2

Accession

Primary (citable) accession number: B1XJI3

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	May 20, 2008
Last modified:	January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program