Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B1XIP6

- B1XIP6_SYNP2

UniProt

B1XIP6 - B1XIP6_SYNP2

Protein
Submitted name:

Sensory box/GGDEF domain/EAL domain protein

Gene

SYNPCC7002_A2167

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Enzyme and pathway databases

    BioCyciSSP32049:GKF7-2168-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Sensory box/GGDEF domain/EAL domain proteinImported
    Gene namesi
    Ordered Locus Names:SYNPCC7002_A2167Imported
    OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
    Taxonomic identifieri32049 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001688: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi32049.SYNPCC7002_A2167.

    Structurei

    3D structure databases

    ProteinModelPortaliB1XIP6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2200.
    HOGENOMiHOG000136246.
    OMAiFVECEAD.
    OrthoDBiEOG69GZGV.

    Family and domain databases

    Gene3Di3.20.20.450. 1 hit.
    InterProiIPR001633. Diguanylate_PEstase_EAL_dom.
    [Graphical view]
    PfamiPF00563. EAL. 1 hit.
    [Graphical view]
    SMARTiSM00052. EAL. 1 hit.
    [Graphical view]
    SUPFAMiSSF141868. SSF141868. 1 hit.
    PROSITEiPS50883. EAL. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1XIP6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATVFPQERR FLELALAQAI ARHQLTVVYQ PQVNPQTTMV TGFEALLRWD    50
    HPQFGSISPT VFIPIAEEAG LIHELGDWVL QRAIKQLKKW HQQSQQTFRM 100
    AVNISVHQVT APHFFERLQD LLVSHQVAPQ HLELEITESV LIEDFQNICA 150
    VLASLQKLGV KIAIDDFGTG YASFNYTRLF GWDTLKLDRC FIKNLHCNKV 200
    NSAITKNLIN MSHDLGFKVV AEGIEHPEEL AMLKQFCCDE VQGYYFSRPL 250
    MPALLEIQQI TGGHLMPGAI AYLAA 275
    Length:275
    Mass (Da):31,166
    Last modified:May 20, 2008 - v1
    Checksum:iE7CA3D39069D84A0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000951 Genomic DNA. Translation: ACB00148.1.
    RefSeqiWP_012307767.1. NC_010475.1.
    YP_001735403.1. NC_010475.1.

    Genome annotation databases

    EnsemblBacteriaiACB00148; ACB00148; SYNPCC7002_A2167.
    GeneIDi6056850.
    KEGGisyp:SYNPCC7002_A2167.
    PATRICi23818978. VBISynSp37135_2422.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000951 Genomic DNA. Translation: ACB00148.1 .
    RefSeqi WP_012307767.1. NC_010475.1.
    YP_001735403.1. NC_010475.1.

    3D structure databases

    ProteinModelPortali B1XIP6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 32049.SYNPCC7002_A2167.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB00148 ; ACB00148 ; SYNPCC7002_A2167 .
    GeneIDi 6056850.
    KEGGi syp:SYNPCC7002_A2167.
    PATRICi 23818978. VBISynSp37135_2422.

    Phylogenomic databases

    eggNOGi COG2200.
    HOGENOMi HOG000136246.
    OMAi FVECEAD.
    OrthoDBi EOG69GZGV.

    Enzyme and pathway databases

    BioCyci SSP32049:GKF7-2168-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.450. 1 hit.
    InterProi IPR001633. Diguanylate_PEstase_EAL_dom.
    [Graphical view ]
    Pfami PF00563. EAL. 1 hit.
    [Graphical view ]
    SMARTi SM00052. EAL. 1 hit.
    [Graphical view ]
    SUPFAMi SSF141868. SSF141868. 1 hit.
    PROSITEi PS50883. EAL. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Synechococcus sp. PCC 7002."
      Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
      Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27264 / PCC 7002 / PR-6Imported.

    Entry informationi

    Entry nameiB1XIP6_SYNP2
    AccessioniPrimary (citable) accession number: B1XIP6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3