B1XIC2 (B1XIC2_SYNP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase 2 HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase 2 HAMAP MF_00484

Gene names

Name:	glgA2 HAMAP MF_00484 EMBL ACB00107.1
Ordered Locus Names:	SYNPCC7002_A2125

Organism

Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP]

Taxonomic identifier

32049 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	490 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
Molecular function	Glycosyltransferase HAMAP MF_00484 SAAS SAAS011835 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	15	1	ADP-glucose By similarity HAMAP MF_00484

Sequences

	Sequence		Length	Mass (Da)
	B1XIC2 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: A3E8AE19824D3C93	FASTA	490	56,587
	10 20 30 40 50 60 MYIVQIASEC APVAKVGGLG DVVYGLSREL SLRGHCVEII LPKYDCLRYD HIWGMHEAYR 70 80 90 100 110 120 DLWVPWFGGA IHCTVFYGWV HGQQCFFIEP HSGDNFFSRG FFYGALDDHM RFAFFSKAAL 130 140 150 160 170 180 EFLQKSNKRP DIIHCHDWQT GLVPVMLFEM YKWHGLWNQR VCYTIHNFKH QGIAGADVLW 190 200 210 220 230 240 ATGLNNEGYY FHYDRLRDNF NPFALNCMKG GIVYANAVTT VSPHHAWEAH YTDIGCGLSH 250 260 270 280 290 300 TLHLHQDKFK GILNGIDYST WNPEVDHNIE LQYSWDSLEN KAKNKKALRD RLLLEDNDRP 310 320 330 340 350 360 IIAYIGRLDD QKGVHLVHHA MYYALNRGAQ FVLLGSATEG SINSWFWHEK FHLNDNPNCH 370 380 390 400 410 420 IELGFNAELS HMIYAGADML VVPSNYEPCG LTQLIALKYG VVPIVRGVGG LVSTVFDRDH 430 440 450 460 470 480 DDKHPPEERN GYVFYQTDNH ALESAMERAI GLYTVYPEEF RKLQIQGMKY DYSWHNPGNE 490 YIDLYEFIRA

References

[1]

"Complete sequence of Synechococcus sp. PCC 7002." Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000951 Genomic DNA. Translation: ACB00107.1.
RefSeq	YP_001735362.1. NC_010475.1.
3D structure databases
ProteinModelPortal	B1XIC2.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XIC2.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6055328.
GenomeReviews	Gene locus SYNPCC7002_A2125 in contig CP000951_GR.
KEGG	syp:SYNPCC7002_A2125.
PATRIC	23818890. VBISynSp37135_2379.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	YDCMRYD.
PhylomeDB	B1XIC2.
ProtClustDB	PRK00654.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1XIC2_SYNP2

Accession

Primary (citable) accession number: B1XIC2

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)