SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B1XHP2

- NU4C1_SYNP2

UniProt

B1XHP2 - NU4C1_SYNP2

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

NAD(P)H-quinone oxidoreductase chain 4 1

Gene
ndhD1, SYNPCC7002_A1973
Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

NDH-1 shuttles electrons from NAD(P)H, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient By similarity.UniRule annotation

Catalytic activityi

NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol.UniRule annotation

GO - Molecular functioni

  1. NADH dehydrogenase (ubiquinone) activity Source: InterPro
  2. quinone binding Source: UniProtKB-KW

GO - Biological processi

  1. mitochondrial electron transport, NADH to ubiquinone Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

NAD, NADP, Plastoquinone

Enzyme and pathway databases

BioCyciSSP32049:GKF7-1974-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
NAD(P)H-quinone oxidoreductase chain 4 1 (EC:1.6.5.-)
Alternative name(s):
NAD(P)H dehydrogenase I, chain 4 1
NDH-1, chain 4 1
Gene namesi
Name:ndhD1
Ordered Locus Names:SYNPCC7002_A1973
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001688: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2621Helical; Reviewed predictionAdd
BLAST
Transmembranei34 – 5421Helical; Reviewed predictionAdd
BLAST
Transmembranei87 – 10721Helical; Reviewed predictionAdd
BLAST
Transmembranei113 – 13321Helical; Reviewed predictionAdd
BLAST
Transmembranei136 – 15621Helical; Reviewed predictionAdd
BLAST
Transmembranei169 – 18921Helical; Reviewed predictionAdd
BLAST
Transmembranei209 – 22921Helical; Reviewed predictionAdd
BLAST
Transmembranei243 – 26321Helical; Reviewed predictionAdd
BLAST
Transmembranei277 – 29721Helical; Reviewed predictionAdd
BLAST
Transmembranei311 – 33121Helical; Reviewed predictionAdd
BLAST
Transmembranei332 – 35221Helical; Reviewed predictionAdd
BLAST
Transmembranei376 – 39621Helical; Reviewed predictionAdd
BLAST
Transmembranei418 – 43821Helical; Reviewed predictionAdd
BLAST
Transmembranei464 – 48421Helical; Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. thylakoid membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Membrane, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 534534NAD(P)H-quinone oxidoreductase chain 4 1UniRule annotationPRO_0000343250Add
BLAST

Keywords - PTMi

Quinone

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A1973.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1008.
HOGENOMiHOG000100683.
KOiK05575.
OMAiLINAWIT.
OrthoDBiEOG647TZ6.

Family and domain databases

HAMAPiMF_00491. NDH1_NuoM.
InterProiIPR022997. NADH_Q_OxRdtase_chain4.
IPR010227. NADH_Q_OxRdtase_chainM/4.
IPR001750. NADH_UbQ/plastoQ_OxRdtase.
IPR003918. NADH_UbQ_OxRdtase.
IPR000260. NADH_UbQ_OxRdtase_chain4_N.
[Graphical view]
PfamiPF00361. Oxidored_q1. 1 hit.
PF01059. Oxidored_q5_N. 1 hit.
[Graphical view]
PRINTSiPR01437. NUOXDRDTASE4.
TIGRFAMsiTIGR01972. NDH_I_M. 1 hit.

Sequencei

Sequence statusi: Complete.

B1XHP2-1 [UniParc]FASTAAdd to Basket

« Hide

MDSLQIPWLT TAIAFPLLAA LVIPLIPDKE GKTIRWYTLG VALTDFALLV    50
TAFWQNYDLG RTEFQLTENF AWIPQLGLNW SLGVDGLSMP LIILATLITT 100
LATLAAWNVT KKPKLFAGLI LVMLSAQIGV FAVQDLLLFF IMWELELVPV 150
YLLISIWGGK KRLYAATKFI LYTALGSVFI LASTLALAFY GGDVTFDMQA 200
LGLKDYPLAL ELLAYAGFLI GFGVKLPIFP LHTWLPDAHS EASAPVSMIL 250
AGVLLKMGGY GLIRLNMEML PDAHIRFAPL LIVLGIVNIV YGALTAFGQT 300
NLKRRLASSS ISHMGFVLVG IASFTDLGMN GAVLQMLSHG FIAAALFFLS 350
GVTYERTHTL MMDEMSGIAR LMPKTFAMFT AAAMASLALP GMSGFVSELT 400
VFLGLSNSDA YSYGFKAIAI FLTAVGVILT PIYLLSMLRE VFYGKGSQAP 450
LSLAAGEDAK PREIFVAVCL LAPIIAIGLY PKLATTTYDL KTVEVASKVR 500
AALPLYAEQL PQNGDRQAQM GLSSQMPALI APRF 534
Length:534
Mass (Da):57,894
Last modified:May 20, 2008 - v1
Checksum:i716A82E305785643
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000951 Genomic DNA. Translation: ACA99960.1.
RefSeqiWP_012307583.1. NC_010475.1.
YP_001735216.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACA99960; ACA99960; SYNPCC7002_A1973.
GeneIDi6055555.
KEGGisyp:SYNPCC7002_A1973.
PATRICi23818584. VBISynSp37135_2232.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000951 Genomic DNA. Translation: ACA99960.1 .
RefSeqi WP_012307583.1. NC_010475.1.
YP_001735216.1. NC_010475.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 32049.SYNPCC7002_A1973.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA99960 ; ACA99960 ; SYNPCC7002_A1973 .
GeneIDi 6055555.
KEGGi syp:SYNPCC7002_A1973.
PATRICi 23818584. VBISynSp37135_2232.

Phylogenomic databases

eggNOGi COG1008.
HOGENOMi HOG000100683.
KOi K05575.
OMAi LINAWIT.
OrthoDBi EOG647TZ6.

Enzyme and pathway databases

BioCyci SSP32049:GKF7-1974-MONOMER.

Family and domain databases

HAMAPi MF_00491. NDH1_NuoM.
InterProi IPR022997. NADH_Q_OxRdtase_chain4.
IPR010227. NADH_Q_OxRdtase_chainM/4.
IPR001750. NADH_UbQ/plastoQ_OxRdtase.
IPR003918. NADH_UbQ_OxRdtase.
IPR000260. NADH_UbQ_OxRdtase_chain4_N.
[Graphical view ]
Pfami PF00361. Oxidored_q1. 1 hit.
PF01059. Oxidored_q5_N. 1 hit.
[Graphical view ]
PRINTSi PR01437. NUOXDRDTASE4.
TIGRFAMsi TIGR01972. NDH_I_M. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Synechococcus sp. PCC 7002."
    Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27264 / PCC 7002 / PR-6.

Entry informationi

Entry nameiNU4C1_SYNP2
AccessioniPrimary (citable) accession number: B1XHP2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: May 20, 2008
Last modified: September 3, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi