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B1XGS7 (B1XGS7_ECODH) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:tdcG EMBL ACB04194.1
Ordered Locus Names:ECDH10B_3286 EMBL ACB04194.1
OrganismEscherichia coli (strain K12 / DH10B) [Complete proteome] [HAMAP] EMBL ACB04194.1
Taxonomic identifier316385 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length454 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B1XGS7 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: AB44206A490456F4

FASTA45448,522
        10         20         30         40         50         60 
MISAFDIFKI GIGPSSSHTV GPMNAGKSFI DRLESSGLLT ATSHIVVDLY GSLSLTGKGH 

        70         80         90        100        110        120 
ATDVAIIMGL AGNSPQDVVI DEIPAFIELV TRSGRLPVAS GAHIVDFPVA KNIIFHPEML 

       130        140        150        160        170        180 
PRHENGMRIT AWKGQEELLS KTYYSVGGGF IVEEEHFGLS HDVETSVPYD FHSAGELLKM 

       190        200        210        220        230        240 
CDYNGLSISG LMMHNELALR SKAEIDAGFA RIWQVMHDGI ERGMNTEGVL PGPLNVPRRA 

       250        260        270        280        290        300 
VALRRQLVSS DNISNDPMNV IDWINMYALA VSEENAAGGR VVTAPTNGAC GIIPAVLAYY 

       310        320        330        340        350        360 
DKFRRPVNER SIARYFLAAG AIGALYKMNA SISGAEVGCQ GEIGVACSMA AAGLTELLGG 

       370        380        390        400        410        420 
SPAQVCNAAE IAMEHNLGLT CDPVAGQVQI PCIERNAINA VKAVNAARMA MRRTSAPRVS 

       430        440        450 
LDKVIETMYE TGKDMNDKYR ETSRGGLAIK VVCG 

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References

[1]"The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse."
Durfee T., Nelson R., Baldwin S., Plunkett G.III., Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R.
J. Bacteriol. 190:2597-2606(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / DH10B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000948 Genomic DNA. Translation: ACB04194.1.
RefSeqYP_001731972.1. NC_010473.1.

3D structure databases

ProteinModelPortalB1XGS7.
SMRB1XGS7. Positions 16-157.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316385.ECDH10B_3286.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB04194; ACB04194; ECDH10B_3286.
GeneID6061115.
KEGGecd:ECDH10B_3286.
PATRIC18466495. VBIEscCol59506_3310.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1760.
HOGENOMHOG000036732.
KOK01752.
OMADSAIMMG.
OrthoDBEOG64V2GZ.

Enzyme and pathway databases

BioCycECOL316385:GJ8B-3148-MONOMER.

Family and domain databases

Gene3D3.30.1330.90. 1 hit.
InterProIPR029009. ASB_dom.
IPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
PfamPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
SUPFAMSSF143548. SSF143548. 1 hit.
TIGRFAMsTIGR00720. sda_mono. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XGS7_ECODH
AccessionPrimary (citable) accession number: B1XGS7
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: June 11, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)