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Protein
Submitted name:

L-serine dehydratase 3

Gene

tdcG

Organism
Escherichia coli (strain K12 / DH10B)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 4 iron, 4 sulfur cluster binding Source: InterPro
  2. L-serine ammonia-lyase activity Source: InterPro

GO - Biological processi

  1. gluconeogenesis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciECOL316385:GJ8B-3148-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
L-serine dehydratase 3Imported
Gene namesi
Name:tdcGImported
Ordered Locus Names:ECDH10B_3286Imported
OrganismiEscherichia coli (strain K12 / DH10B)Imported
Taxonomic identifieri316385 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001689: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316385.ECDH10B_3286.

Structurei

3D structure databases

ProteinModelPortaliB1XGS7.
SMRiB1XGS7. Positions 16-157.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1760.
HOGENOMiHOG000036732.
KOiK01752.
OMAiKLCERNG.
OrthoDBiEOG64V2GZ.

Family and domain databases

Gene3Di3.30.1330.90. 1 hit.
InterProiIPR029009. ASB_dom.
IPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
PfamiPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
SUPFAMiSSF143548. SSF143548. 1 hit.
TIGRFAMsiTIGR00720. sda_mono. 1 hit.

Sequencei

Sequence statusi: Complete.

B1XGS7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MISAFDIFKI GIGPSSSHTV GPMNAGKSFI DRLESSGLLT ATSHIVVDLY
60 70 80 90 100
GSLSLTGKGH ATDVAIIMGL AGNSPQDVVI DEIPAFIELV TRSGRLPVAS
110 120 130 140 150
GAHIVDFPVA KNIIFHPEML PRHENGMRIT AWKGQEELLS KTYYSVGGGF
160 170 180 190 200
IVEEEHFGLS HDVETSVPYD FHSAGELLKM CDYNGLSISG LMMHNELALR
210 220 230 240 250
SKAEIDAGFA RIWQVMHDGI ERGMNTEGVL PGPLNVPRRA VALRRQLVSS
260 270 280 290 300
DNISNDPMNV IDWINMYALA VSEENAAGGR VVTAPTNGAC GIIPAVLAYY
310 320 330 340 350
DKFRRPVNER SIARYFLAAG AIGALYKMNA SISGAEVGCQ GEIGVACSMA
360 370 380 390 400
AAGLTELLGG SPAQVCNAAE IAMEHNLGLT CDPVAGQVQI PCIERNAINA
410 420 430 440 450
VKAVNAARMA MRRTSAPRVS LDKVIETMYE TGKDMNDKYR ETSRGGLAIK

VVCG
Length:454
Mass (Da):48,522
Last modified:May 20, 2008 - v1
Checksum:iAB44206A490456F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000948 Genomic DNA. Translation: ACB04194.1.
RefSeqiYP_001731972.1. NC_010473.1.

Genome annotation databases

EnsemblBacteriaiACB04194; ACB04194; ECDH10B_3286.
GeneIDi6061115.
KEGGiecd:ECDH10B_3286.
PATRICi18466495. VBIEscCol59506_3310.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000948 Genomic DNA. Translation: ACB04194.1.
RefSeqiYP_001731972.1. NC_010473.1.

3D structure databases

ProteinModelPortaliB1XGS7.
SMRiB1XGS7. Positions 16-157.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316385.ECDH10B_3286.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB04194; ACB04194; ECDH10B_3286.
GeneIDi6061115.
KEGGiecd:ECDH10B_3286.
PATRICi18466495. VBIEscCol59506_3310.

Phylogenomic databases

eggNOGiCOG1760.
HOGENOMiHOG000036732.
KOiK01752.
OMAiKLCERNG.
OrthoDBiEOG64V2GZ.

Enzyme and pathway databases

BioCyciECOL316385:GJ8B-3148-MONOMER.

Family and domain databases

Gene3Di3.30.1330.90. 1 hit.
InterProiIPR029009. ASB_dom.
IPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
PfamiPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
SUPFAMiSSF143548. SSF143548. 1 hit.
TIGRFAMsiTIGR00720. sda_mono. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse."
    Durfee T., Nelson R., Baldwin S., Plunkett G. III, Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R.
    J. Bacteriol. 190:2597-2606(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / DH10BImported.

Entry informationi

Entry nameiB1XGS7_ECODH
AccessioniPrimary (citable) accession number: B1XGS7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 7, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.