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B1XF58 (B1XF58_ECODH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted dethiobiotin synthetase EMBL ACB02799.1
Gene names
Name:ynfK EMBL ACB02799.1
Ordered Locus Names:ECDH10B_1726
OrganismEscherichia coli (strain K12 / DH10B) [Complete proteome] [HAMAP]
Taxonomic identifier316385 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length231 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring By similarity. SAAS SAAS004472

Catalytic activity

ATP + 7,8-diaminononanoate + CO2 = ADP + phosphate + dethiobiotin. SAAS SAAS004472

Cofactor

Magnesium By similarity. SAAS SAAS004472

Pathway

Cofactor biosynthesis; biotin biosynthesis; biotin from 7,8-diaminononanoate: step 1/2. SAAS SAAS004472

Subcellular location

Cytoplasm By similarity SAAS SAAS004472.

Sequences

Sequence LengthMass (Da)Tools
B1XF58 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 35A04911309A99B0

FASTA23124,981
        10         20         30         40         50         60 
MLKRFFITGT DTSVGKTVVS RALLQALASQ GKTVAGYKPV AKGSKETPEG LRNKDALVLQ 

        70         80         90        100        110        120 
SVSTIELPYE AVNPIALSEE ESSVAHSCPI NYTLISNGLA NLTEKVDHVV VEGTGGWRSL 

       130        140        150        160        170        180 
MNDLRPLSEW VVQEQLPVLM VVGIQEGCIN HALLTAQAIA NDGLPLIGWV ANRINPGLAH 

       190        200        210        220        230 
YAEIIDVLGK KLPAPLIGEL PYLPRAEQRE LGQYIRLAML RSVLAVDRVT V

« Hide

References

[1]"The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse."
Durfee T., Nelson R., Baldwin S., Plunkett G. III, Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R.
J. Bacteriol. 190:2597-2606(2008) [PubMed: 18245285] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000948 Genomic DNA. Translation: ACB02799.1.
RefSeqYP_001730577.1. NC_010473.1.

3D structure databases

ProteinModelPortalB1XF58.
SMRB1XF58. Positions 2-220.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1XF58.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000011372; EBESCP00000010900; EBESCG00000010434.
GeneID6058911.
GenomeReviewsGene locus ECDH10B_1726 in contig CP000948_GR.
KEGGecd:ECDH10B_1726.
PATRIC18463306. VBIEscCol59506_1750.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000010427.
HOGENOMHBG650065.
OMAINPGLSH.
ProtClustDBPRK12374.

Family and domain databases

HAMAPMF_00336. BioD.
[Tree]
InterProIPR002586. CbiA_P_synth.
IPR004472. DTB_synth_BioD.
[Graphical view]
KOK01935.
PfamPF01656. CbiA. 1 hit.
[Graphical view]
PIRSFPIRSF006755. DTB_synth. 1 hit.
TIGRFAMsTIGR00347. BioD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XF58_ECODH
AccessionPrimary (citable) accession number: B1XF58
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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