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B1XEJ9

- RPIA_ECODH

UniProt

B1XEJ9 - RPIA_ECODH

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Protein

Ribose-5-phosphate isomerase A

Gene
rpiA, ECDH10B_3089
Organism
Escherichia coli (strain K12 / DH10B)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate By similarity.UniRule annotation

Catalytic activityi

D-ribose 5-phosphate = D-ribulose 5-phosphate.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei103 – 1031Proton acceptor By similarity
Binding sitei121 – 1211Substrate By similarity

GO - Molecular functioni

  1. ribose-5-phosphate isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. pentose-phosphate shunt, non-oxidative branch Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Enzyme and pathway databases

BioCyciECOL316385:GJ8B-2963-MONOMER.
UniPathwayiUPA00115; UER00412.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribose-5-phosphate isomerase A (EC:5.3.1.6)
Alternative name(s):
Phosphoriboisomerase A
Short name:
PRI
Gene namesi
Name:rpiA
Ordered Locus Names:ECDH10B_3089
OrganismiEscherichia coli (strain K12 / DH10B)
Taxonomic identifieri316385 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001689: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 219219Ribose-5-phosphate isomerase AUniRule annotationPRO_1000097661Add
BLAST

Proteomic databases

PRIDEiB1XEJ9.

Interactioni

Subunit structurei

Homodimer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi316385.ECDH10B_3089.

Structurei

3D structure databases

ProteinModelPortaliB1XEJ9.
SMRiB1XEJ9. Positions 2-219.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni28 – 314Substrate binding By similarity
Regioni81 – 844Substrate binding By similarity
Regioni94 – 974Substrate binding By similarity

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0120.
HOGENOMiHOG000276368.
KOiK01807.
OMAiMDQLEMK.
OrthoDBiEOG67MF61.

Family and domain databases

HAMAPiMF_00170. Rib_5P_isom_A.
InterProiIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
[Graphical view]
PANTHERiPTHR11934. PTHR11934. 1 hit.
PfamiPF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00021. rpiA. 1 hit.

Sequencei

Sequence statusi: Complete.

B1XEJ9-1 [UniParc]FASTAAdd to Basket

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MTQDELKKAV GWAALQYVQP GTIVGVGTGS TAAHFIDALG TMKGQIEGAV    50
SSSDASTEKL KSLGIHVFDL NEVDSLGIYV DGADEINGHM QMIKGGGAAL 100
TREKIIASVA EKFICIADAS KQVDILGKFP LPVEVIPMAR SAVARQLVKL 150
GGRPEYRQGV VTDNGNVILD VHGMEILDPI AMENAINAIP GVVTVGLFAN 200
RGADVALIGT PDGVKTIVK 219
Length:219
Mass (Da):22,860
Last modified:May 20, 2008 - v1
Checksum:iB53C49CC3DB188BC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000948 Genomic DNA. Translation: ACB04015.1.
RefSeqiYP_001731793.1. NC_010473.1.

Genome annotation databases

EnsemblBacteriaiACB04015; ACB04015; ECDH10B_3089.
GeneIDi6060133.
KEGGiecd:ECDH10B_3089.
PATRICi18466085. VBIEscCol59506_3107.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000948 Genomic DNA. Translation: ACB04015.1 .
RefSeqi YP_001731793.1. NC_010473.1.

3D structure databases

ProteinModelPortali B1XEJ9.
SMRi B1XEJ9. Positions 2-219.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316385.ECDH10B_3089.

Proteomic databases

PRIDEi B1XEJ9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACB04015 ; ACB04015 ; ECDH10B_3089 .
GeneIDi 6060133.
KEGGi ecd:ECDH10B_3089.
PATRICi 18466085. VBIEscCol59506_3107.

Phylogenomic databases

eggNOGi COG0120.
HOGENOMi HOG000276368.
KOi K01807.
OMAi MDQLEMK.
OrthoDBi EOG67MF61.

Enzyme and pathway databases

UniPathwayi UPA00115 ; UER00412 .
BioCyci ECOL316385:GJ8B-2963-MONOMER.

Family and domain databases

HAMAPi MF_00170. Rib_5P_isom_A.
InterProi IPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
[Graphical view ]
PANTHERi PTHR11934. PTHR11934. 1 hit.
Pfami PF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00021. rpiA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse."
    Durfee T., Nelson R., Baldwin S., Plunkett G. III, Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R.
    J. Bacteriol. 190:2597-2606(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / DH10B.

Entry informationi

Entry nameiRPIA_ECODH
AccessioniPrimary (citable) accession number: B1XEJ9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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