B1XE14 (B1XE14_ECODH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CP4-6 prophage; predicted xylosidase/arabinosidase EMBL ACB01438.1

Gene names

Name:	yagH EMBL ACB01438.1
Ordered Locus Names:	ECDH10B_0258

Organism

Escherichia coli (strain K12 / DH10B) [Complete proteome] [HAMAP]

Taxonomic identifier

316385 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	536 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1XE14 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 60D3F038215CD216	FASTA	536	60,825
	10 20 30 40 50 60 MEITNPILTG FNPDPSLCRQ GEDYYIATST FEWFPGVRIY HSRDLKNWSL VSTPLDRVSM 70 80 90 100 110 120 LDMKGNPDSG GIWAPCLSYA DGKFWLLYTD VKIVDSPWKN GRNFLVTAPS IEGPWSEPIP 130 140 150 160 170 180 MGNGGFDPSL FHDDDGRKYY IYRPWGPRHH SNPHNTIVLQ AFDPQTGTLS PERKTLFTGT 190 200 210 220 230 240 PLCYTEGAHL YRHAGWYYLM AAEGGTSYEH AVVVLRSKNI DGPYELHPDV TMMTSWHLPE 250 260 270 280 290 300 NPLQKSGHGS LLQTHTGEWY MAYLTSRPLR LPGVPLLASG GRGYCPLGRE TGIARIEWRD 310 320 330 340 350 360 GWPYVEGGKH AQLTVKGPQV AEQPAAVPGN WRDDFDASSL DPELQTLRIP FDDTLGSLTA 370 380 390 400 410 420 RPGFLRLYGN DSLNSTFTQS TVARRWQHFA FRAETRMEFS PVHFQQSAGL TCYYNSKNWS 430 440 450 460 470 480 YCFVDYEEGQ GRTIKVIQLD HNVPSWPLHE QPIPVPEHAE SVWLRVDVDT LVYRYSYSFD 490 500 510 520 530 GETWHTVPVT YEAWKLSDDY IGGRGFFTGA FVGLHCEDIS GDGCYADFDY FTYEPV

References

[1]

"The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse." Durfee T., Nelson R., Baldwin S., Plunkett G. III, Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R. J. Bacteriol. 190:2597-2606(2008) [PubMed: 18245285] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000948 Genomic DNA. Translation: ACB01438.1.
RefSeq	YP_001729216.1. NC_010473.1.
3D structure databases
ProteinModelPortal	B1XE14.
SMR	B1XE14. Positions 2-536.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XE14.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000011862; EBESCP00000011390; EBESCG00000010924.
GeneID	6058952.
GenomeReviews	Gene locus ECDH10B_0258 in contig CP000948_GR.
KEGG	ecd:ECDH10B_0258.
PATRIC	18460264. VBIEscCol59506_0251.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000012072.
HOGENOM	HBG347235.
OMA	IGSWFEQ.
ProtClustDB	CLSK807482.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR009784. DUF1349. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01198.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF07081. DUF1349. 1 hit. PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1XE14_ECODH

Accession

Primary (citable) accession number: B1XE14

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)