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B1XCX5 (B1XCX5_ECODH) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:rpiB EMBL ACB05086.1
Ordered Locus Names:ECDH10B_4281 EMBL ACB05086.1
OrganismEscherichia coli (strain K12 / DH10B) [Complete proteome] [HAMAP] EMBL ACB05086.1
Taxonomic identifier316385 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length149 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ACB05086.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpentose-phosphate shunt

Inferred from electronic annotation. Source: InterPro

   Molecular_functionribose-5-phosphate isomerase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1XCX5 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: BE610B5F995CEEB6

FASTA14916,073
        10         20         30         40         50         60 
MKKIAFGCDH VGFILKHEIV AHLVERGVEV IDKGTWSSER TDYPHYASQV ALAVAGGEVD 

        70         80         90        100        110        120 
GGILICGTGV GISIAANKFA GIRAVVCSEP YSAQLSRQHN DTNVLAFGSR VVGLELAKMI 

       130        140 
VDAWLGAQYE GGRHQQRVEA ITAIEQRRN 

« Hide

References

[1]"The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse."
Durfee T., Nelson R., Baldwin S., Plunkett G.III., Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R.
J. Bacteriol. 190:2597-2606(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / DH10B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000948 Genomic DNA. Translation: ACB05086.1.
RefSeqYP_001732864.1. NC_010473.1.

3D structure databases

ProteinModelPortalB1XCX5.
SMRB1XCX5. Positions 1-147.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316385.ECDH10B_4281.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB05086; ACB05086; ECDH10B_4281.
GeneID6059494.
KEGGecd:ECDH10B_4281.
PATRIC18468599. VBIEscCol59506_4324.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0698.
HOGENOMHOG000226301.
KOK01808.
OMAETHHANQ.
OrthoDBEOG679TJ4.

Enzyme and pathway databases

BioCycECOL316385:GJ8B-4098-MONOMER.

Family and domain databases

Gene3D3.40.1400.10. 1 hit.
InterProIPR004785. RpiB.
IPR003500. RpiB_LacA_LacB.
[Graphical view]
PANTHERPTHR30345. PTHR30345. 1 hit.
PfamPF02502. LacAB_rpiB. 1 hit.
[Graphical view]
PIRSFPIRSF005384. RpiB_LacA_B. 1 hit.
SUPFAMSSF89623. SSF89623. 1 hit.
TIGRFAMsTIGR01120. rpiB. 1 hit.
TIGR00689. rpiB_lacA_lacB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XCX5_ECODH
AccessionPrimary (citable) accession number: B1XCX5
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)