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B1XCV9 (B1XCV9_ECODH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:nrfE EMBL ACB05070.1
Ordered Locus Names:ECDH10B_4265 EMBL ACB05070.1
OrganismEscherichia coli (strain K12 / DH10B) [Complete proteome] [HAMAP] EMBL ACB05070.1
Taxonomic identifier316385 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACB05070.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcytochrome complex assembly

Inferred from electronic annotation. Source: InterPro

respiratory chain complex IV assembly

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionheme transporter activity

Inferred from electronic annotation. Source: InterPro

lyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1XCV9 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 138C2E21933699E3

FASTA55261,295
        10         20         30         40         50         60 
MLTPLTAFAG VRLRWPAMMR LTCIGILAQF ALLLLAFGVL TYCFLISDFS VIYVAQHSYS 

        70         80         90        100        110        120 
LLSWELKLAA VWGGHEGSLL LWVLLLSAWS ALFAWHYRQQ TDPLFPLTLA VLSLMLAALL 

       130        140        150        160        170        180 
LFVVLWSDPF VRIFPPAIEG RDLNPMLQHP GLIFHPPLLY LGYGGLMVAA SVALASLLRG 

       190        200        210        220        230        240 
EFDGACARIC WRWALPGWSA LTAGIILGSW WAYCELGWGG WWFWDPVENA SLLPWLSATA 

       250        260        270        280        290        300 
LLHSLSLTRQ RGIFCHWSLL LAIVTLMLSL LGTLIVRSGI LVSVHAFALD NVRAVPLFSL 

       310        320        330        340        350        360 
FALISLASLA LYGWRARDGG PAVHFSGLSR EMLILATLLL FCAVLLIVLV GTLYPMIYGL 

       370        380        390        400        410        420 
LGWGRLSVGA PYFNRATLPF GLLMLVVIVL ATFVSGKRVQ LPALVAHAGV LLFAAGVVVS 

       430        440        450        460        470        480 
SVSRQEISLN LQPGQQVTLA GYTFRFECLD LQAKGNYTSE KAIVALFDHQ QRIGELTPER 

       490        500        510        520        530        540 
RFYEARRQQM MEPSIRWNGI HDWYAVMGEK TGPDRYAFRL YVQSGVRWIW GGGLLMIAGA 

       550 
LLSGWRGKKR DE 

« Hide

References

[1]"The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse."
Durfee T., Nelson R., Baldwin S., Plunkett G.III., Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R.
J. Bacteriol. 190:2597-2606(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / DH10B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000948 Genomic DNA. Translation: ACB05070.1.
RefSeqYP_001732848.1. NC_010473.1.

3D structure databases

ProteinModelPortalB1XCV9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316385.ECDH10B_4265.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB05070; ACB05070; ECDH10B_4265.
GeneID6061371.
KEGGecd:ECDH10B_4265.
PATRIC18468557. VBIEscCol59506_4303.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1138.
HOGENOMHOG000274659.
KOK04016.
OMAAATWGGH.
OrthoDBEOG6RRKJ4.
ProtClustDBPRK10369.

Enzyme and pathway databases

BioCycECOL316385:GJ8B-4082-MONOMER.

Family and domain databases

InterProIPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
IPR003568. Cyt_c_biogenesis_CcmF.
IPR003570. Cyt_c_biogenesis_NrfE.
[Graphical view]
PfamPF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSPR01410. CCBIOGENESIS.
PR01413. NRFEBIOGNSIS.
TIGRFAMsTIGR00353. nrfE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XCV9_ECODH
AccessionPrimary (citable) accession number: B1XCV9
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: April 16, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)