B1X7A2 (B1X7A2_ECODH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted pectinesterase EMBL ACB01973.1

Gene names

Name:	ybhC EMBL ACB01973.1
Ordered Locus Names:	ECDH10B_0840

Organism

Escherichia coli (strain K12 / DH10B) [Complete proteome] [HAMAP]

Taxonomic identifier

316385 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	427 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pectinesterase family. RuleBase RU004180

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall modification Inferred from electronic annotation. Source: InterPro
Cellular component	cell wall Inferred from electronic annotation. Source: InterPro
Molecular function	pectinesterase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1X7A2 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 208831BE0EDBCB5C	FASTA	427	46,082
	10 20 30 40 50 60 MNTFSVSRLA LALAFGVTLT ACSSTPPDQR PSDQTAPGTS SRPILSAKEA QNFDAQHYFA 70 80 90 100 110 120 SLTPGAAAWN PSPITLPAQP DFVVGPAGTQ GVTHTTIQAA VDAAIIKRTN KRQYIAVMPG 130 140 150 160 170 180 EYQGTVYVPA APGGITLYGT GEKPIDVKIG LSLDGGMSPA DWRHDVNPRG KYMPGKPAWY 190 200 210 220 230 240 MYDSCQSKRS DSIGVLCSAV FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDQV 250 260 270 280 290 300 QINNVNILGR QNTFFVTNSG VQNRLETNRQ PRTLVTNSYI EGDVDIVSGR GAVVFDNTEF 310 320 330 340 350 360 RVVNSRTQQE AYVFAPATLS NIYYGFLAVN SRFNAFGDGV AQLGRSLDVD ANTNGQVVIR 370 380 390 400 410 420 DSAINEGFNT AKPWADAVIS NRPFAGNTGS VDDNDEIQRN LNDTNYNRMW EYNNRGVGSK VVAEAKK

References

[1]

"The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse." Durfee T., Nelson R., Baldwin S., Plunkett G. III, Burland V., Mau B., Petrosino J.F., Qin X., Muzny D.M., Ayele M., Gibbs R.A., Csorgo B., Posfai G., Weinstock G.M., Blattner F.R. J. Bacteriol. 190:2597-2606(2008) [PubMed: 18245285] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000948 Genomic DNA. Translation: ACB01973.1.
RefSeq	YP_001729751.1. NC_010473.1.
3D structure databases
ProteinModelPortal	B1X7A2.
SMR	B1X7A2. Positions 29-420.
ModBase	Search...
Protein-protein interaction databases
STRING	B1X7A2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000010236; EBESCP00000009764; EBESCG00000009298.
GeneID	6061157.
GenomeReviews	Gene locus ECDH10B_0840 in contig CP000948_GR.
KEGG	ecd:ECDH10B_0840.
PATRIC	18461488. VBIEscCol59506_0846.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000010934.
HOGENOM	HBG416454.
OMA	FLATNSR.
ProtClustDB	PRK10531.
Family and domain databases
InterPro	IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. IPR018040. Pectinesterase_AS. IPR000070. Pectinesterase_cat. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01051.
Pfam	PF01095. Pectinesterase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS00503. PECTINESTERASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1X7A2_ECODH

Accession

Primary (citable) accession number: B1X7A2

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)