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B1X1N7 (B1X1N7_CYAA5) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608
Gene names
Name:alr EMBL ACB53067.1
Ordered Locus Names:cce_3719 EMBL ACB53067.1
OrganismCyanothece sp. (strain ATCC 51142) [Complete proteome] [HAMAP] EMBL ACB53067.1
Taxonomic identifier43989 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Cyanothece

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1X1N7 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 2EA070C414682EC1

FASTA40444,348
        10         20         30         40         50         60 
MFSQESISGV ATKNRYNYHL SEIIRQRAWV EIDLSALSHN VVQIKQLLSP KTTLMAVVKA 

        70         80         90        100        110        120 
DAYGHGAIAV AQTVLQAGAK ALAVATLGEG IELREAGITA PILILGAINT PEEITAIAHW 

       130        140        150        160        170        180 
NLEPTLCYPE QALMVSDTLS QYEKPLSVHL KLDTGMSRLG TPWHQGTEFA SLVQQLPYLN 

       190        200        210        220        230        240 
LSSVYSHLAT ADDPDPSHMY LQHKRFKTAI DNLKAQGIVP PRLHFANSAA TLIAPQLHYD 

       250        260        270        280        290        300 
LVRVGLALYG LYPADHLRSI VPLKPVLQVK AKITQIKSIP ANTGVSYGYQ FVSDRPMKIA 

       310        320        330        340        350        360 
VVGIGYADGV PRNLSNRLQV LIHGQRACQI GAITMDQLML DVSHLRHVKV GDVVTLIGKD 

       370        380        390        400 
EDQEISADHW AKMLGTISWE ILCGFKHRLP RIKQLNKVEL GVVG

« Hide

References

[1]"The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle."
Welsh E.A., Liberton M., Stockel J., Loh T., Elvitigala T., Wang C., Wollam A., Fulton R.S., Clifton S.W., Jacobs J.M., Aurora R., Ghosh B.K., Sherman L.A., Smith R.D., Wilson R.K., Pakrasi H.B.
Proc. Natl. Acad. Sci. U.S.A. 105:15094-15099(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51142 EMBL ACB53067.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000806 Genomic DNA. Translation: ACB53067.1.
RefSeqYP_001805133.1. NC_010546.1.

3D structure databases

ProteinModelPortalB1X1N7.
ModBaseSearch...

Protein-protein interaction databases

STRING43989.cce_3719.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB53067; ACB53067; cce_3719.
GeneID6170784.
KEGGcyt:cce_3719.
PATRIC21545816. VBICyaSp130209_3722.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAIRLPKAY.
ProtClustDBPRK00053.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1X1N7_CYAA5
AccessionPrimary (citable) accession number: B1X1N7
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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