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B1X077 (B1X077_CYAA5) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transcription antitermination protein nusG RuleBase RU000538
Gene names
Name:nusG EMBL ACB49578.1
Ordered Locus Names:cce_0227
OrganismCyanothece sp. (strain ATCC 51142) [Complete proteome] [HAMAP]
Taxonomic identifier43989 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Cyanothece

Protein attributes

Sequence length214 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538

Sequence similarities

Belongs to the nusG family. RuleBase RU003559

Sequences

Sequence LengthMass (Da)Tools
B1X077 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 4B1E164B6C75D702

FASTA21424,418
        10         20         30         40         50         60 
MGIREGILMS FAHDHTSEPE QQQEKPKRAA RWYAVQVASG CEKRVKNNLE QRIQTLDVAD 

        70         80         90        100        110        120 
RILQIQIPKT PTVKVRKDGS RQQGEEKVFP GYVLVKMIMD DDAWLVVKNT PNVINFVGSE 

       130        140        150        160        170        180 
QRRAYGRGRG HVKPLPLSPS EVERIFRQAE QPEPVVKIDM EIGDKILVLS GPFKDFEGEV 

       190        200        210 
VEVSSERNKL RALLSIFGRD TPVELEFNQV EKQN

« Hide

References

[1]"The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle."
Welsh E.A., Liberton M., Stoeckel J., Loh T., Elvitigala T., Wang C., Wollam A., Fulton R.S., Clifton S.W., Jacobs J.M., Aurora R., Ghosh B.K., Sherman L.A., Smith R.D., Wilson R.K., Pakrasi H.B.
Proc. Natl. Acad. Sci. U.S.A. 105:15094-15099(2008) [PubMed: 18812508] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000806 Genomic DNA. Translation: ACB49578.1.
RefSeqYP_001801644.1. NC_010546.1.

3D structure databases

ProteinModelPortalB1X077.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1X077.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6167193.
GenomeReviewsGene locus cce_0227 in contig CP000806_GR.
KEGGcyt:cce_0227.
PATRIC21538916. VBICyaSp130209_0309.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG751162.
OMAVASGCEK.
PhylomeDBB1X077.
ProtClustDBPRK05609.

Family and domain databases

InterProIPR005824. KOW.
IPR001062. Transcrpt_antiterm_NusG.
IPR015869. Transcrpt_antiterm_NusG_bac_CS.
IPR006645. Transcrpt_antiterm_NusG_N.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KOK02601.
PfamPF00467. KOW. 1 hit.
PF02357. NusG. 1 hit.
[Graphical view]
PRINTSPR00338. NUSGTNSCPFCT.
SMARTSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMSSF82679. Transcrpt_antiterm_NusG_N. 1 hit.
SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR00922. NusG. 1 hit.
PROSITEPS01014. NUSG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1X077_CYAA5
AccessionPrimary (citable) accession number: B1X077
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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