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B1WYC8 (B1WYC8_CYAA5) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788
Gene names
Ordered Locus Names:cce_0006 EMBL ACB49358.1
OrganismCyanothece sp. (strain ATCC 51142) [Complete proteome] [HAMAP] EMBL ACB49358.1
Taxonomic identifier43989 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Cyanothece

Protein attributes

Sequence length234 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788

Sequence similarities

Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Sequences

Sequence LengthMass (Da)Tools
B1WYC8 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 786B4102E014E7B3

FASTA23427,214
        10         20         30         40         50         60 
MIIQHSQPKR KGTKYRLKKP YKLVFNLIIV VGLIGLVYSF KKNTQPLVNP SLVTHLPELE 

        70         80         90        100        110        120 
MSGGDPYIRA LMLTISASES NHKNSYYLLY GGSHVHNLQQ HPDQCIPINI GPNRGNCSTA 

       130        140        150        160        170        180 
AGRYQFLNST WQEKARKYHP NPQKNYRQYI YSFEPKYQDI VVYRWLKDHH QWNVDLLTLL 

       190        200        210        220        230 
KQDQVEEVLR KLSNVWTSLG GGIEDNSMTP HLPSIYRYFL AQELNRENAD QNSL

« Hide

References

[1]"The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle."
Welsh E.A., Liberton M., Stockel J., Loh T., Elvitigala T., Wang C., Wollam A., Fulton R.S., Clifton S.W., Jacobs J.M., Aurora R., Ghosh B.K., Sherman L.A., Smith R.D., Wilson R.K., Pakrasi H.B.
Proc. Natl. Acad. Sci. U.S.A. 105:15094-15099(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51142 EMBL ACB49358.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000806 Genomic DNA. Translation: ACB49358.1.
RefSeqYP_001801424.1. NC_010546.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING43989.cce_0006.

Protein family/group databases

CAZyGH104. Glycoside Hydrolase Family 104.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB49358; ACB49358; cce_0006.
GeneID6167269.
KEGGcyt:cce_0006.
PATRIC21538484. VBICyaSp130209_0094.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4678.
HOGENOMHOG000054655.
KOK11331.
OMAGYGIETN.
ProtClustDBCLSK893156.

Family and domain databases

InterProIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1WYC8_CYAA5
AccessionPrimary (citable) accession number: B1WYC8
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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