B1WQS8 (RL15_CYAA5) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15

Gene names

Name:	rplO
Ordered Locus Names:	cce_4032

Organism

Cyanothece sp. (strain ATCC 51142) [Complete proteome] [HAMAP]

Taxonomic identifier

43989 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Cyanothece

Protein attributes

Sequence length	158 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_01341_B
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01341_B
Sequence similarities	Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 158	158	50S ribosomal protein L15 HAMAP MF_01341_B		PRO_1000166288

Sequences

	Sequence		Length	Mass (Da)
	B1WQS8 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: BBE9A7A6AAB80FD2	FASTA	158	16,730
	10 20 30 40 50 60 MRIHEVNPQK GSTKRRRRIG RGISAGQGAS GGFGMRGQKS RSGTGTKAGF EGGQMPLYRR 70 80 90 100 110 120 VPKLKHFPLV NPSHYTIINV GKLNSLSPNT EVTLESLMEV GLITSNDGPL KVLGNGELTV 130 140 150 PLTVRAPKFT ASAKAKIESA GGSCQDLSDT SNAPSNNE

References

[1]

"The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle." Welsh E.A., Liberton M., Stoeckel J., Loh T., Elvitigala T., Wang C., Wollam A., Fulton R.S., Clifton S.W., Jacobs J.M., Aurora R., Ghosh B.K., Sherman L.A., Smith R.D., Wilson R.K., Pakrasi H.B. Proc. Natl. Acad. Sci. U.S.A. 105:15094-15099(2008) [PubMed: 18812508] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51142.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000806 Genomic DNA. Translation: ACB53380.1.
RefSeq	YP_001805446.1. NC_010546.1.
3D structure databases
ProteinModelPortal	B1WQS8.
ModBase	Search...
Protein-protein interaction databases
STRING	B1WQS8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6171108.
GenomeReviews	Gene locus cce_4032 in contig CP000806_GR.
KEGG	cyt:cce_4032.
PATRIC	21546432. VBICyaSp130209_4021.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG727142.
OMA	RKGRGHA.
PhylomeDB	B1WQS8.
ProtClustDB	PRK05592.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B. [Tree]
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
KO	K02876.
PANTHER	PTHR12934. Ribosom_L15_bac. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. RplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL15_CYAA5

Accession

Primary (citable) accession number: B1WQS8

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	May 20, 2008
Last modified:	January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program