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Protein
Submitted name:

Pcp4l1 protein

Gene

Pcp4l1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Pcp4l1 proteinImported
Submitted name:
Protein Pcp4l1Imported
Submitted name:
RCG20116, isoform CRA_cImported
Gene namesi
Name:Pcp4l1Imported
ORF Names:rCG_20116Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 13

Organism-specific databases

RGDi1593809. Pcp4l1.

Expressioni

Gene expression databases

BgeeiENSRNOG00000003209.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J4T9. Eukaryota.
ENOG410Z3GR. LUCA.
GeneTreeiENSGT00530000064299.
HOGENOMiHOG000054222.
HOVERGENiHBG108235.
TreeFamiTF336068.

Family and domain databases

InterProiIPR000048. IQ_motif_EF-hand-BS.
IPR033234. PCP4-like_1.
[Graphical view]
PANTHERiPTHR15359:SF5. PTHR15359:SF5. 1 hit.
PROSITEiPS50096. IQ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1WC83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSELNTKTPP ATSQASDPEE KGKPGSIKKA EEEEEIDIDL TAPETEKAAL
60
AIQGKFRRFQ KRKKDSSS
Length:68
Mass (Da):7,505
Last modified:May 20, 2008 - v1
Checksum:iA4D51B02666C6533
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC099236 Genomic DNA. No translation available.
BC162039 mRNA. Translation: AAI62039.1.
CH473985 Genomic DNA. Translation: EDL94604.1.
RefSeqiNP_001119565.1. NM_001126093.2.
UniGeneiRn.155340.

Genome annotation databases

EnsembliENSRNOT00000004347; ENSRNOP00000004347; ENSRNOG00000003209.
GeneIDi685448.
KEGGirno:685448.
UCSCiRGD:1593809. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC099236 Genomic DNA. No translation available.
BC162039 mRNA. Translation: AAI62039.1.
CH473985 Genomic DNA. Translation: EDL94604.1.
RefSeqiNP_001119565.1. NM_001126093.2.
UniGeneiRn.155340.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000004347; ENSRNOP00000004347; ENSRNOG00000003209.
GeneIDi685448.
KEGGirno:685448.
UCSCiRGD:1593809. rat.

Organism-specific databases

CTDi654790.
RGDi1593809. Pcp4l1.

Phylogenomic databases

eggNOGiENOG410J4T9. Eukaryota.
ENOG410Z3GR. LUCA.
GeneTreeiENSGT00530000064299.
HOGENOMiHOG000054222.
HOVERGENiHBG108235.
TreeFamiTF336068.

Gene expression databases

BgeeiENSRNOG00000003209.

Family and domain databases

InterProiIPR000048. IQ_motif_EF-hand-BS.
IPR033234. PCP4-like_1.
[Graphical view]
PANTHERiPTHR15359:SF5. PTHR15359:SF5. 1 hit.
PROSITEiPS50096. IQ. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1WC83_RAT
AccessioniPrimary (citable) accession number: B1WC83
Secondary accession number(s): D4A945
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: September 7, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.