B1W3Z6 (RL24_STRGG) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L24

Gene names

Name:	rplX
Ordered Locus Names:	SGR_2823

Organism

Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) [Complete proteome] [HAMAP]

Taxonomic identifier

455632 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length	107 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP MF_01326_B One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity. HAMAP MF_01326_B
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01326_B
Sequence similarities	Belongs to the ribosomal protein L24P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 107	107	50S ribosomal protein L24 HAMAP MF_01326_B		PRO_1000142043

Sequences

	Sequence		Length	Mass (Da)
	B1W3Z6 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 9FE43EAA97868642	FASTA	107	11,623
	10 20 30 40 50 60 MKIKKGDLVQ VITGKDKGKQ GKVIVAYPAQ DRVLVEGVNR VKKHTKAGQT ARGSQTGGIV 70 80 90 100 TTEAPIHVSN VQLVVEKDGN KVVTRVGYRF DDEGNKIRVA KRTGEDI

References

[1]

"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350." Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S. J. Bacteriol. 190:4050-4060(2008) [PubMed: 18375553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009493 Genomic DNA. Translation: BAG19652.1.
RefSeq	YP_001824335.1. NC_010572.1.
3D structure databases
ProteinModelPortal	B1W3Z6.
ModBase	Search...
Protein-protein interaction databases
STRING	B1W3Z6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6213551.
GenomeReviews	Gene locus SGR_2823 in contig AP009493_GR.
KEGG	sgr:SGR_2823.
PATRIC	23752177. VBIStrGri32265_2885.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG588578.
OMA	KPTRVGY.
ProtClustDB	PRK00004.
Family and domain databases
HAMAP	MF_01326_B. Ribosomal_L24_B. [Tree]
InterPro	IPR005824. KOW. IPR003256. Ribosomal_L24. IPR005825. Ribosomal_L24/26_CS. IPR014723. Ribosomal_L24_SH3-like. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.200. Ribosomal_L24_SH3-like. 1 hit.
KO	K02895.
PANTHER	PTHR12903. Ribosomal_L24. 1 hit.
Pfam	PF00467. KOW. 1 hit. [Graphical view]
SMART	SM00739. KOW. 1 hit. [Graphical view]
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01079. RplX_bact. 1 hit.
PROSITE	PS01108. RIBOSOMAL_L24. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL24_STRGG

Accession

Primary (citable) accession number: B1W3Z6

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	May 20, 2008
Last modified:	January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program