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B1W3V9 (B1W3V9_STRGG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length392 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase SAAS SAAS020622 RuleBase RU000608
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1W3V9 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: F561E3AA2B14A0AC

FASTA39240,603
        10         20         30         40         50         60 
MNETASLRAR AEIDLAALRA NVRVLRERAA GAQLMAVVKS DGYGHGAVPC ARAAREAGAT 

        70         80         90        100        110        120 
WLGTATPQEA LALRAAGLDG RIMCWLWTPG GPWREAIEAD IDVSVGGMWA LREVVAAAAA 

       130        140        150        160        170        180 
AGRTARIQLK ADTGLGRGGC QPADWPELVG EALAAERAGR VEVTGLWSHF ACADEPGHPS 

       190        200        210        220        230        240 
IAAQLAVYRD LVAYAEKEGV EPEVRHLANS PATLTIPEAH FDLVRTGIAM YGVSPAPELG 

       250        260        270        280        290        300 
TSADLGLRPV MTLAASVALV KDAPAGHGIS YGHHYTTTAE TTLGLIPVGY ADGVPRHASG 

       310        320        330        340        350        360 
TGPVLVGGKV RRVAGRVAMD QFVVDLDGDR PEAGAEAVLF GPGDRGEPTA QDWAEAAGTI 

       370        380        390 
AYEIVTRIGT RVPRVYVDGA AGPGEAAGGG RR

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References

[1]"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009493 Genomic DNA. Translation: BAG19615.1.
RefSeqYP_001824298.1. NC_010572.1.

3D structure databases

ProteinModelPortalB1W3V9.
SMRB1W3V9. Positions 8-379.
ModBaseSearch...

Protein-protein interaction databases

STRING455632.SGR_2786.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG19615; BAG19615; SGR_2786.
GeneID6210086.
KEGGsgr:SGR_2786.
PATRIC23752103. VBIStrGri32265_2848.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAHQLETAV.
ProtClustDBCLSK536972.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1W3V9_STRGG
AccessionPrimary (citable) accession number: B1W3V9
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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