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Protein
Submitted name:

Putative DNA hydrolase

Gene

SGR_5732

Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotationSAAS annotationImported

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-5807-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA hydrolaseImported
Gene namesi
Ordered Locus Names:SGR_5732Imported
OrganismiStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Imported
Taxonomic identifieri455632 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
Proteomesi
  • UP000001685 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi455632.SGR_5732.

Structurei

3D structure databases

ProteinModelPortaliB1W214.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 160145Nudix hydrolaseInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the Nudix hydrolase family.UniRule annotation
Contains nudix hydrolase domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105BZX. Bacteria.
COG1051. LUCA.
HOGENOMiHOG000261973.
KOiK03574.
OMAiQVYETVW.
OrthoDBiEOG6NWBTW.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1W214-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTPAPEGYD PHAYAPFAVT VDLAVFTVRE ARLHVLLVER GQEPFRGRWA
60 70 80 90 100
LPGGFLLPRE SAEDAARREL AEETGLGQDT VGALHLEQLR TYTAPDRDPR
110 120 130 140 150
MRVVSVAYAA LLPDLPEPRG GGDAASARWW DTGAAGPLAF DHDRILADAH
160 170 180 190 200
DRIGAKLEYS CLATAFCPAE FTLGELQQVY ETVWGVELDR PNFRRKVLNA
210 220 230 240 250
PGFVQAVEGP PRRTGGRGKP AALYRAGDAT ALHPPLLRPP GPDAPHSAPE

GRER
Length:254
Mass (Da):27,624
Last modified:May 20, 2008 - v1
Checksum:i0D84D7C314E02853
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG22561.1.
RefSeqiWP_003970037.1. NC_010572.1.

Genome annotation databases

EnsemblBacteriaiBAG22561; BAG22561; SGR_5732.
GeneIDi6209758.
KEGGisgr:SGR_5732.
PATRICi23758263. VBIStrGri32265_5871.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG22561.1.
RefSeqiWP_003970037.1. NC_010572.1.

3D structure databases

ProteinModelPortaliB1W214.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi455632.SGR_5732.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAG22561; BAG22561; SGR_5732.
GeneIDi6209758.
KEGGisgr:SGR_5732.
PATRICi23758263. VBIStrGri32265_5871.

Phylogenomic databases

eggNOGiENOG4105BZX. Bacteria.
COG1051. LUCA.
HOGENOMiHOG000261973.
KOiK03574.
OMAiQVYETVW.
OrthoDBiEOG6NWBTW.

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-5807-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
    Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
    J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 4626 / NBRC 13350Imported.

Entry informationi

Entry nameiB1W214_STRGG
AccessioniPrimary (citable) accession number: B1W214
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 16, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.