Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

B1VZI4

- B1VZI4_STRGG

UniProt

B1VZI4 - B1VZI4_STRGG

Protein

Alpha-amylase

Gene

SGR_5280

Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciSGRI455632:GD3A-5351-MONOMER.

    Protein family/group databases

    CAZyiCBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:SGR_5280Imported
    OrganismiStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Imported
    Taxonomic identifieri455632 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000001685: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi455632.SGR_5280.

    Structurei

    3D structure databases

    ProteinModelPortaliB1VZI4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiGQNIFVV.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1VZI4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARRSLSAAL ALVAAAAAAL VVPTGFGAAG TARAAAPGDK DVTAVMFEWK    50
    FASIAKACTD TLGPAGYGYV QVSPPQEHIQ GGQWWTSYQP VSYRIAGRLG 100
    DRAAFAAMVN TCHAAGVKVI ADSVINHMSA GSGTGTGGSS YTKYDYPGLY 150
    SGADMDDCRS QIGNNYNDRG NVQNCELVGL ADLDTGEEYV RGRIAGYLND 200
    LLSLGVDGFR IDAAKHMPAG DLANIKSRLT NPNVYWKHEA IYGAGEAVSP 250
    SEYLGSGDVQ EFRYGRSLKQ VFLNENLAHL KNFGEGWGFM ESGKSAVFVD 300
    NHDTERGGDT LNYKNGSAYT LAAVFMLAYP YGSPDVHSGY EFSDHDAGPP 350
    NGGQVNACYS DGWKCQHAWR EISSMVGFRN TARGQSVGNW WDNGGDQIAF 400
    GRGNKAYVAI NHEGSALTRT FQTSLPAGDY CDVQSGKGVT VNGSGQFTAT 450
    VPAGTAVALH TGARTCGGGG SNPDPGPGNG TSGASFGVNA TTQLGQNIHV 500
    TGDQAALGNW NPATAPKLDP AAYPVWKLDV NLPAGTTFAY KYVRKDAAGN 550
    VTWESGANRT ATVPASGKVT LTADVWRG 578
    Length:578
    Mass (Da):60,665
    Last modified:May 20, 2008 - v1
    Checksum:iFBF6207A14F9121F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009493 Genomic DNA. Translation: BAG22109.1.
    RefSeqiYP_001826792.1. NC_010572.1.

    Genome annotation databases

    EnsemblBacteriaiBAG22109; BAG22109; SGR_5280.
    GeneIDi6209901.
    KEGGisgr:SGR_5280.
    PATRICi23757333. VBIStrGri32265_5410.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009493 Genomic DNA. Translation: BAG22109.1 .
    RefSeqi YP_001826792.1. NC_010572.1.

    3D structure databases

    ProteinModelPortali B1VZI4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 455632.SGR_5280.

    Protein family/group databases

    CAZyi CBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAG22109 ; BAG22109 ; SGR_5280 .
    GeneIDi 6209901.
    KEGGi sgr:SGR_5280.
    PATRICi 23757333. VBIStrGri32265_5410.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi GQNIFVV.
    OrthoDBi EOG6RZB1B.

    Enzyme and pathway databases

    BioCyci SGRI455632:GD3A-5351-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
      Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
      J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 4626 / NBRC 13350Imported.

    Entry informationi

    Entry nameiB1VZI4_STRGG
    AccessioniPrimary (citable) accession number: B1VZI4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3