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B1VZI4

- B1VZI4_STRGG

UniProt

B1VZI4 - B1VZI4_STRGG

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Protein

Alpha-amylase

Gene

SGR_5280

Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-5351-MONOMER.

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:SGR_5280Imported
OrganismiStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Imported
Taxonomic identifieri455632 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000001685: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi455632.SGR_5280.

Structurei

3D structure databases

ProteinModelPortaliB1VZI4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000253313.
KOiK01176.
OMAiGQNIFVV.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1VZI4 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARRSLSAAL ALVAAAAAAL VVPTGFGAAG TARAAAPGDK DVTAVMFEWK
60 70 80 90 100
FASIAKACTD TLGPAGYGYV QVSPPQEHIQ GGQWWTSYQP VSYRIAGRLG
110 120 130 140 150
DRAAFAAMVN TCHAAGVKVI ADSVINHMSA GSGTGTGGSS YTKYDYPGLY
160 170 180 190 200
SGADMDDCRS QIGNNYNDRG NVQNCELVGL ADLDTGEEYV RGRIAGYLND
210 220 230 240 250
LLSLGVDGFR IDAAKHMPAG DLANIKSRLT NPNVYWKHEA IYGAGEAVSP
260 270 280 290 300
SEYLGSGDVQ EFRYGRSLKQ VFLNENLAHL KNFGEGWGFM ESGKSAVFVD
310 320 330 340 350
NHDTERGGDT LNYKNGSAYT LAAVFMLAYP YGSPDVHSGY EFSDHDAGPP
360 370 380 390 400
NGGQVNACYS DGWKCQHAWR EISSMVGFRN TARGQSVGNW WDNGGDQIAF
410 420 430 440 450
GRGNKAYVAI NHEGSALTRT FQTSLPAGDY CDVQSGKGVT VNGSGQFTAT
460 470 480 490 500
VPAGTAVALH TGARTCGGGG SNPDPGPGNG TSGASFGVNA TTQLGQNIHV
510 520 530 540 550
TGDQAALGNW NPATAPKLDP AAYPVWKLDV NLPAGTTFAY KYVRKDAAGN
560 570
VTWESGANRT ATVPASGKVT LTADVWRG
Length:578
Mass (Da):60,665
Last modified:May 20, 2008 - v1
Checksum:iFBF6207A14F9121F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP009493 Genomic DNA. Translation: BAG22109.1.
RefSeqiYP_001826792.1. NC_010572.1.

Genome annotation databases

EnsemblBacteriaiBAG22109; BAG22109; SGR_5280.
GeneIDi6209901.
KEGGisgr:SGR_5280.
PATRICi23757333. VBIStrGri32265_5410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP009493 Genomic DNA. Translation: BAG22109.1 .
RefSeqi YP_001826792.1. NC_010572.1.

3D structure databases

ProteinModelPortali B1VZI4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 455632.SGR_5280.

Protein family/group databases

CAZyi CBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAG22109 ; BAG22109 ; SGR_5280 .
GeneIDi 6209901.
KEGGi sgr:SGR_5280.
PATRICi 23757333. VBIStrGri32265_5410.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000253313.
KOi K01176.
OMAi GQNIFVV.
OrthoDBi EOG6RZB1B.

Enzyme and pathway databases

BioCyci SGRI455632:GD3A-5351-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
    Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
    J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 4626 / NBRC 13350Imported.

Entry informationi

Entry nameiB1VZI4_STRGG
AccessioniPrimary (citable) accession number: B1VZI4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: October 1, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3