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B1VZI4 (B1VZI4_STRGG) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length578 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B1VZI4 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: FBF6207A14F9121F

FASTA57860,665
        10         20         30         40         50         60 
MARRSLSAAL ALVAAAAAAL VVPTGFGAAG TARAAAPGDK DVTAVMFEWK FASIAKACTD 

        70         80         90        100        110        120 
TLGPAGYGYV QVSPPQEHIQ GGQWWTSYQP VSYRIAGRLG DRAAFAAMVN TCHAAGVKVI 

       130        140        150        160        170        180 
ADSVINHMSA GSGTGTGGSS YTKYDYPGLY SGADMDDCRS QIGNNYNDRG NVQNCELVGL 

       190        200        210        220        230        240 
ADLDTGEEYV RGRIAGYLND LLSLGVDGFR IDAAKHMPAG DLANIKSRLT NPNVYWKHEA 

       250        260        270        280        290        300 
IYGAGEAVSP SEYLGSGDVQ EFRYGRSLKQ VFLNENLAHL KNFGEGWGFM ESGKSAVFVD 

       310        320        330        340        350        360 
NHDTERGGDT LNYKNGSAYT LAAVFMLAYP YGSPDVHSGY EFSDHDAGPP NGGQVNACYS 

       370        380        390        400        410        420 
DGWKCQHAWR EISSMVGFRN TARGQSVGNW WDNGGDQIAF GRGNKAYVAI NHEGSALTRT 

       430        440        450        460        470        480 
FQTSLPAGDY CDVQSGKGVT VNGSGQFTAT VPAGTAVALH TGARTCGGGG SNPDPGPGNG 

       490        500        510        520        530        540 
TSGASFGVNA TTQLGQNIHV TGDQAALGNW NPATAPKLDP AAYPVWKLDV NLPAGTTFAY 

       550        560        570 
KYVRKDAAGN VTWESGANRT ATVPASGKVT LTADVWRG 

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References

[1]"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009493 Genomic DNA. Translation: BAG22109.1.
RefSeqYP_001826792.1. NC_010572.1.

3D structure databases

ProteinModelPortalB1VZI4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING455632.SGR_5280.

Protein family/group databases

CAZyCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG22109; BAG22109; SGR_5280.
GeneID6209901.
KEGGsgr:SGR_5280.
PATRIC23757333. VBIStrGri32265_5410.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000253313.
KOK01176.
OMAGQNIFVV.
OrthoDBEOG6RZB1B.

Enzyme and pathway databases

BioCycSGRI455632:GD3A-5351-MONOMER.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1VZI4_STRGG
AccessionPrimary (citable) accession number: B1VZI4
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: July 9, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)