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B1VXP3 (B1VXP3_STRGG) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length217 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Ontologies

Keywords
   Biological processDNA synthesis HAMAP-Rule MF_00124 SAAS SAAS020634
   Cellular componentCytoplasm HAMAP-Rule MF_00124
   LigandATP-binding HAMAP-Rule MF_00124 SAAS SAAS020634
Nucleotide-binding
   Molecular functionKinase HAMAP-Rule MF_00124 SAAS SAAS020634 EMBL BAG18509.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA replication

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

thymidine kinase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding86 – 894ATP By similarity HAMAP-Rule MF_00124

Sites

Active site871Proton acceptor By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
B1VXP3 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: C4B8ACBF31371E02

FASTA21723,513
        10         20         30         40         50         60 
MPELVFFSGT MDCGKSTLAL QIGHNRSARG LQGVIFTRDD RAGEGKLSSR LGLVTDAVEA 

        70         80         90        100        110        120 
EEGMDLYAHI VGRVSRGGRV DYVIVDEAQF LAPDQIDQLA RVVDDLGLDV FAFGITTDFR 

       130        140        150        160        170        180 
TKLFPGSQRL IELADRIEAL QVEALCWCGA RATHNARTVD GEMVVEGAQV VVGDVNRQAG 

       190        200        210 
EVGYEVLCRR HHRRRTTATA ARASSLSPDV LPVASDA 

« Hide

References

[1]"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009493 Genomic DNA. Translation: BAG18509.1.
RefSeqYP_001823192.1. NC_010572.1.

3D structure databases

ProteinModelPortalB1VXP3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING455632.SGR_1680.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG18509; BAG18509; SGR_1680.
GeneID6213464.
KEGGsgr:SGR_1680.
PATRIC23749787. VBIStrGri32265_1702.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1435.
HOGENOMHOG000076391.
KOK00857.
OMATICACGR.
OrthoDBEOG69D3J2.

Enzyme and pathway databases

BioCycSGRI455632:GD3A-1684-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1VXP3_STRGG
AccessionPrimary (citable) accession number: B1VXP3
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: June 11, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)