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B1VU09

- B1VU09_STRGG

UniProt

B1VU09 - B1VU09_STRGG

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Protein
Submitted name:

Putative DNA ligase

Gene

SGR_1024

Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-1027-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported
Gene namesi
Ordered Locus Names:SGR_1024Imported
OrganismiStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Imported
Taxonomic identifieri455632 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000001685: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi455632.SGR_1024.

Structurei

3D structure databases

ProteinModelPortaliB1VU09.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1VU09-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDLPVMPPVK PMLAKSVSRI PPGMSYEAKW DGFRAIVYRD GDEVEIGSRT
60 70 80 90 100
GKSLTRYFPD LVDVVRDRLP PRCVIDGEIV IAHEGRLDFE RLGERIHPAD
110 120 130 140 150
SRVRLLAEQT PASLIAFDVL AVDDTSLLST RQADRREVLR AALADASAPV
160 170 180 190 200
FLAPATTDIE VAREWFDRYE GAGLDGIVAK PLDLPYRPDA RAMYKIKHER
210 220 230 240 250
TADVVVAGYR EHKSGPVVGS LLLGLYDSDG VLQHVGVCAA FPMKRRAELA
260 270 280 290 300
EELAPLRIEF AEHPWAAWAE AAAHERSRLP GTQNRWSGKK DQSWVPLRPE
310 320 330 340 350
RVCEVAYDHM EGDRFRHTTQ FRRWRPDRSP AGCTYAQLEE VVSYDLSEVL

SGG
Length:353
Mass (Da):39,581
Last modified:May 20, 2008 - v1
Checksum:i78BFA7C5ED11E4F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG17853.1.
RefSeqiYP_001822536.1. NC_010572.1.

Genome annotation databases

EnsemblBacteriaiBAG17853; BAG17853; SGR_1024.
GeneIDi6208912.
KEGGisgr:SGR_1024.
PATRICi23748423. VBIStrGri32265_1021.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG17853.1 .
RefSeqi YP_001822536.1. NC_010572.1.

3D structure databases

ProteinModelPortali B1VU09.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 455632.SGR_1024.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAG17853 ; BAG17853 ; SGR_1024 .
GeneIDi 6208912.
KEGGi sgr:SGR_1024.
PATRICi 23748423. VBIStrGri32265_1021.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci SGRI455632:GD3A-1027-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
    Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
    J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 4626 / NBRC 13350Imported.

Entry informationi

Entry nameiB1VU09_STRGG
AccessioniPrimary (citable) accession number: B1VU09
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: October 1, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3