B1VU09 (B1VU09_STRGG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase EMBL BAG17853.1

Gene names

Ordered Locus Names:

SGR_1024

Organism

Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) [Complete proteome] [HAMAP] EMBL BAG17853.1

Taxonomic identifier

455632 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces › Streptomyces griseus group › Streptomyces griseus › Streptomyces griseus subsp. griseus

Protein attributes

Sequence length	353 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL BAG17853.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1VU09 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 78BFA7C5ED11E4F5	FASTA	353	39,581
	10 20 30 40 50 60 MDLPVMPPVK PMLAKSVSRI PPGMSYEAKW DGFRAIVYRD GDEVEIGSRT GKSLTRYFPD 70 80 90 100 110 120 LVDVVRDRLP PRCVIDGEIV IAHEGRLDFE RLGERIHPAD SRVRLLAEQT PASLIAFDVL 130 140 150 160 170 180 AVDDTSLLST RQADRREVLR AALADASAPV FLAPATTDIE VAREWFDRYE GAGLDGIVAK 190 200 210 220 230 240 PLDLPYRPDA RAMYKIKHER TADVVVAGYR EHKSGPVVGS LLLGLYDSDG VLQHVGVCAA 250 260 270 280 290 300 FPMKRRAELA EELAPLRIEF AEHPWAAWAE AAAHERSRLP GTQNRWSGKK DQSWVPLRPE 310 320 330 340 350 RVCEVAYDHM EGDRFRHTTQ FRRWRPDRSP AGCTYAQLEE VVSYDLSEVL SGG

References

[1]

"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350." Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S. J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009493 Genomic DNA. Translation: BAG17853.1.
RefSeq	YP_001822536.1. NC_010572.1.
3D structure databases
ProteinModelPortal	B1VU09.
ModBase	Search...
Protein-protein interaction databases
STRING	455632.SGR_1024.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAG17853; BAG17853; SGR_1024.
GeneID	6208912.
KEGG	sgr:SGR_1024.
PATRIC	23748423. VBIStrGri32265_1021.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222508.
KO	K01971.
OMA	FKIKHER.
ProtClustDB	PRK08224.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1VU09_STRGG

Accession

Primary (citable) accession number: B1VU09

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)