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B1VU09 (B1VU09_STRGG) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B1VU09 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 78BFA7C5ED11E4F5

FASTA35339,581
        10         20         30         40         50         60 
MDLPVMPPVK PMLAKSVSRI PPGMSYEAKW DGFRAIVYRD GDEVEIGSRT GKSLTRYFPD 

        70         80         90        100        110        120 
LVDVVRDRLP PRCVIDGEIV IAHEGRLDFE RLGERIHPAD SRVRLLAEQT PASLIAFDVL 

       130        140        150        160        170        180 
AVDDTSLLST RQADRREVLR AALADASAPV FLAPATTDIE VAREWFDRYE GAGLDGIVAK 

       190        200        210        220        230        240 
PLDLPYRPDA RAMYKIKHER TADVVVAGYR EHKSGPVVGS LLLGLYDSDG VLQHVGVCAA 

       250        260        270        280        290        300 
FPMKRRAELA EELAPLRIEF AEHPWAAWAE AAAHERSRLP GTQNRWSGKK DQSWVPLRPE 

       310        320        330        340        350 
RVCEVAYDHM EGDRFRHTTQ FRRWRPDRSP AGCTYAQLEE VVSYDLSEVL SGG 

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References

[1]"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009493 Genomic DNA. Translation: BAG17853.1.
RefSeqYP_001822536.1. NC_010572.1.

3D structure databases

ProteinModelPortalB1VU09.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING455632.SGR_1024.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG17853; BAG17853; SGR_1024.
GeneID6208912.
KEGGsgr:SGR_1024.
PATRIC23748423. VBIStrGri32265_1021.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAERTADCV.
OrthoDBEOG63NMFT.
ProtClustDBPRK08224.

Enzyme and pathway databases

BioCycSGRI455632:GD3A-1027-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1VU09_STRGG
AccessionPrimary (citable) accession number: B1VU09
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 13, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)