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B1VU09

- B1VU09_STRGG

UniProt

B1VU09 - B1VU09_STRGG

Protein
Submitted name:

Putative DNA ligase

Gene

SGR_1024

Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSGRI455632:GD3A-1027-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligaseImported
    Gene namesi
    Ordered Locus Names:SGR_1024Imported
    OrganismiStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Imported
    Taxonomic identifieri455632 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
    ProteomesiUP000001685: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi455632.SGR_1024.

    Structurei

    3D structure databases

    ProteinModelPortaliB1VU09.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1VU09-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDLPVMPPVK PMLAKSVSRI PPGMSYEAKW DGFRAIVYRD GDEVEIGSRT    50
    GKSLTRYFPD LVDVVRDRLP PRCVIDGEIV IAHEGRLDFE RLGERIHPAD 100
    SRVRLLAEQT PASLIAFDVL AVDDTSLLST RQADRREVLR AALADASAPV 150
    FLAPATTDIE VAREWFDRYE GAGLDGIVAK PLDLPYRPDA RAMYKIKHER 200
    TADVVVAGYR EHKSGPVVGS LLLGLYDSDG VLQHVGVCAA FPMKRRAELA 250
    EELAPLRIEF AEHPWAAWAE AAAHERSRLP GTQNRWSGKK DQSWVPLRPE 300
    RVCEVAYDHM EGDRFRHTTQ FRRWRPDRSP AGCTYAQLEE VVSYDLSEVL 350
    SGG 353
    Length:353
    Mass (Da):39,581
    Last modified:May 20, 2008 - v1
    Checksum:i78BFA7C5ED11E4F5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009493 Genomic DNA. Translation: BAG17853.1.
    RefSeqiYP_001822536.1. NC_010572.1.

    Genome annotation databases

    EnsemblBacteriaiBAG17853; BAG17853; SGR_1024.
    GeneIDi6208912.
    KEGGisgr:SGR_1024.
    PATRICi23748423. VBIStrGri32265_1021.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009493 Genomic DNA. Translation: BAG17853.1 .
    RefSeqi YP_001822536.1. NC_010572.1.

    3D structure databases

    ProteinModelPortali B1VU09.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 455632.SGR_1024.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAG17853 ; BAG17853 ; SGR_1024 .
    GeneIDi 6208912.
    KEGGi sgr:SGR_1024.
    PATRICi 23748423. VBIStrGri32265_1021.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci SGRI455632:GD3A-1027-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
      Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
      J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 4626 / NBRC 13350Imported.

    Entry informationi

    Entry nameiB1VU09_STRGG
    AccessioniPrimary (citable) accession number: B1VU09
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3