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Protein
Submitted name:

Putative MerR-family transcriptional regulator

Gene

SGR_3804

Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-3835-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative MerR-family transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SGR_3804Imported
OrganismiStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Imported
Taxonomic identifieri455632 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000001685: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi455632.SGR_3804.

Structurei

3D structure databases

ProteinModelPortaliB1VQY2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0789.
HOGENOMiHOG000235782.
OMAiNQDTAYA.
OrthoDBiEOG6CK7SS.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTiSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1VQY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAVSGELVT IGEFARLSRL SAKALRRYDE LGLLRPALVD PVNGYRYYDP
60 70 80 90 100
AQAEEARLVA WLRRIGMPLS RIGRVVALDA GAAAVEIRAY WARVEAETAA
110 120 130 140 150
RRDLAMYLVD HLSAEGRTMT RISGGTGDAG GTGGTGGAGD PGVIGGTGSG
160 170 180 190 200
AGAVPLAIRC AALTDTGTVR TTNQDAAFAG PRLLAVADGF GAGGAEASAA
210 220 230 240 250
AIEALKPSVW GAREGALSAA DLLNALEDTA DSASRAVRDA VAPCAAPDGS
260 270 280 290 300
GTTLTAMLWT GSRLGLVHIG DSRAYLLRGG ELFRITQDHS LVQSMIDDGS
310 320 330 340 350
LTEEEAASHP QRALLLRALV GGVGSAPVAV AVRPDVRLRE VRAGDRYLLC
360 370 380 390 400
SDGLSAVVDE AELRAAVIAA DDPEEAVRRL VGLAREAGGP DNVACAVADV

AVEG
Length:404
Mass (Da):41,499
Last modified:May 20, 2008 - v1
Checksum:i3DA4BBA954E84F9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG20633.1.
RefSeqiYP_001825316.1. NC_010572.1.

Genome annotation databases

EnsemblBacteriaiBAG20633; BAG20633; SGR_3804.
GeneIDi6215979.
KEGGisgr:SGR_3804.
PATRICi23754184. VBIStrGri32265_3874.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG20633.1.
RefSeqiYP_001825316.1. NC_010572.1.

3D structure databases

ProteinModelPortaliB1VQY2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi455632.SGR_3804.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAG20633; BAG20633; SGR_3804.
GeneIDi6215979.
KEGGisgr:SGR_3804.
PATRICi23754184. VBIStrGri32265_3874.

Phylogenomic databases

eggNOGiCOG0789.
HOGENOMiHOG000235782.
OMAiNQDTAYA.
OrthoDBiEOG6CK7SS.

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-3835-MONOMER.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTiSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
    Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
    J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 4626 / NBRC 13350Imported.

Entry informationi

Entry nameiB1VQY2_STRGG
AccessioniPrimary (citable) accession number: B1VQY2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: February 4, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.