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B1VQY2 (B1VQY2_STRGG) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH merR-type DNA-binding domain. RuleBase RU000703

Ontologies

Keywords
   LigandDNA-binding RuleBase RU000703
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processregulation of transcription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1VQY2 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 3DA4BBA954E84F9C

FASTA40441,499
        10         20         30         40         50         60 
MRAVSGELVT IGEFARLSRL SAKALRRYDE LGLLRPALVD PVNGYRYYDP AQAEEARLVA 

        70         80         90        100        110        120 
WLRRIGMPLS RIGRVVALDA GAAAVEIRAY WARVEAETAA RRDLAMYLVD HLSAEGRTMT 

       130        140        150        160        170        180 
RISGGTGDAG GTGGTGGAGD PGVIGGTGSG AGAVPLAIRC AALTDTGTVR TTNQDAAFAG 

       190        200        210        220        230        240 
PRLLAVADGF GAGGAEASAA AIEALKPSVW GAREGALSAA DLLNALEDTA DSASRAVRDA 

       250        260        270        280        290        300 
VAPCAAPDGS GTTLTAMLWT GSRLGLVHIG DSRAYLLRGG ELFRITQDHS LVQSMIDDGS 

       310        320        330        340        350        360 
LTEEEAASHP QRALLLRALV GGVGSAPVAV AVRPDVRLRE VRAGDRYLLC SDGLSAVVDE 

       370        380        390        400 
AELRAAVIAA DDPEEAVRRL VGLAREAGGP DNVACAVADV AVEG 

« Hide

References

[1]"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009493 Genomic DNA. Translation: BAG20633.1.
RefSeqYP_001825316.1. NC_010572.1.

3D structure databases

ProteinModelPortalB1VQY2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING455632.SGR_3804.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG20633; BAG20633; SGR_3804.
GeneID6215979.
KEGGsgr:SGR_3804.
PATRIC23754184. VBIStrGri32265_3874.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0789.
HOGENOMHOG000235782.
OMANQDTAYA.
OrthoDBEOG6CK7SS.
ProtClustDBCLSK903257.

Enzyme and pathway databases

BioCycSGRI455632:GD3A-3835-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1VQY2_STRGG
AccessionPrimary (citable) accession number: B1VQY2
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: April 16, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)