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B1VNU7 (B1VNU7_STRGG) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SGR_291
OrganismStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) [Complete proteome] [HAMAP]
Taxonomic identifier455632 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length722 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1VNU7 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: A5DA1E0E3FB72880

FASTA72277,012
        10         20         30         40         50         60 
MAPAEGSLWP DAVFADPDPD TDAESYVLSG RMADSFVRLN TMAQAYRQQG TGLTGNTALR 

        70         80         90        100        110        120 
DAVLTGLEHL STQVYNDGQS RYGNWYSWQI GAPQALLDVC VLMYDAIAQE RLARYCAAVD 

       130        140        150        160        170        180 
HFVPDSAVAS YTGTSTGANR VDLCRVLALR GVVGGKAAKI ALARDALSPV FPLVTRGDGL 

       190        200        210        220        230        240 
YADGSFIQHT TVPYTGSYGS VMLGGLGLLF ALLKGTTWEV TDPKRQVVFD AVENAWAPFL 

       250        260        270        280        290        300 
YNGLVMDSVA GRAISRGEVD DHRRGHPIMA SIVLLGRGAS AAENARWRGL VKGWAQRDYY 

       310        320        330        340        350        360 
SPPLSNPSLG LTALARLKSV LDDPALTPVA EPAGHRLFPD MARATHRRPG WAASLSMADR 

       370        380        390        400        410        420 
RVTYYEAGNG ENLRGWHTGS GMLYWWGDTF ANGQYSDAFW PTVDPYRLPG TTASRKVLAD 

       430        440        450        460        470        480 
GAGGDWGVSL PDVNWVGGVT DSKRAAVGQY LKGLTSTLMA KKSWFFLDDT VVCLGAGIHG 

       490        500        510        520        530        540 
RDGAAVETTV DNRNLGPTGN APFTADGSVK PLTLPWSATL TGASWAHLAG HGGYVFPGGA 

       550        560        570        580        590        600 
TVKALREDRT GRWRDINKAG STDPVSRKYL TLWFDHGQDP TDATYAYQLL PGASPQRTAA 

       610        620        630        640        650        660 
RAADSGWLRV LANTDAQQGV SVPSLRLTAV NFWFGGTVGP LVADAPCSVM VTEHADGTAT 

       670        680        690        700        710        720 
VCVSDPMRAR TSLTLTWNRA VALVVSKPAT VTSAATGASL RLVFGDLSGT RGATQTVKVR 


LS 

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References

[1]"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
J. Bacteriol. 190:4050-4060(2008) [PubMed: 18375553] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP009493 Genomic DNA. Translation: BAG17120.1.
RefSeqYP_001821803.1. NC_010572.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB1VNU7.

Protein family/group databases

CAZyPL8. Polysaccharide Lyase Family 8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6213656.
GenomeReviewsGene locus SGR_291 in contig AP009493_GR.
KEGGsgr:SGR_291.
PATRIC23746917. VBIStrGri32265_0270.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG699337.
OMATKTYRNI.
ProtClustDBCLSK570151.

Family and domain databases

InterProIPR008929. Chondroitin_lyas.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011071. Lyase_8-like_C.
IPR012970. Lyase_8_alpha_N.
IPR004103. Lyase_8_C.
IPR003159. Lyase_8_central_dom.
IPR012329. Lyase_8_N.
[Graphical view]
Gene3DG3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
G3DSA:2.60.220.10. Lyase_8_C. 1 hit.
G3DSA:1.50.10.100. Lyase_8_N. 1 hit.
KOK01727.
PfamPF02278. Lyase_8. 1 hit.
PF02884. Lyase_8_C. 1 hit.
PF08124. Lyase_8_N. 1 hit.
[Graphical view]
SUPFAMSSF48230. Chondroitin_lyas. 1 hit.
SSF74650. Gal_mut_like. 1 hit.
SSF49863. Lyase_like_C. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1VNU7_STRGG
AccessionPrimary (citable) accession number: B1VNU7
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)