B1VNM0 (B1VNM0_STRGG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative xylanase EMBL BAG17043.1

Gene names

Ordered Locus Names:

SGR_214

Organism

Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) [Complete proteome] [HAMAP]

Taxonomic identifier

455632 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length	533 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL BAG17043.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1VNM0 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: F1D165C2035E3702	FASTA	533	58,031
	10 20 30 40 50 60 MSRPWTADLG DGTYRNPVLN ADWSDPDVVR VGDDYYLTAS SFGRSPGLPL LHSRDLVNWT 70 80 90 100 110 120 AVGHALDRLE PAAEFSAPRH DRGVWAPSLR HRGGRFWIFW GDPDHGIQQI NAERVEGPWS 130 140 150 160 170 180 APHLLKAGKG LIDACPLWDE ETGEAYLVHA WAKSRSGVKN RLTGHRMSPD GRELLDEGAT 190 200 210 220 230 240 LVDADRIPGW FTLEGPKLYR RDGCFVILAP AGGVETGWQG AFRSRDFFGP YEERVVLAQG 250 260 270 280 290 300 RTDVNGPHQG GWVDTPAGED WFLHFQARGA YGRVVHLQPM RWDADGWPVI GDRGEPVLRH 310 320 330 340 350 360 TKPVAPAQPV AAPAVDDDFP GGRPGAQWQW TANPRHGWAA RGAGDGLRLT CVRTADEHDL 370 380 390 400 410 420 RLLPNILVQR LPAEAFTVDV ELVLDSVEAG AKAGLAVLGD AFGWIGLAVA ADGTPRLVHR 430 440 450 460 470 480 FAEGAAAHER DAAGSRASPG GRARLRVEVT AGARCRFFAD TGDGFWPSGQ VFAATPWRWV 490 500 510 520 530 GALLGLFATA PAGTGPAGTA RFTTFRVTGP NPPQKCTRHD PSHPHHPTEK SRR

References

[1]

"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350." Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S. J. Bacteriol. 190:4050-4060(2008) [PubMed: 18375553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP009493 Genomic DNA. Translation: BAG17043.1.
RefSeq	YP_001821726.1. NC_010572.1.
3D structure databases
ProteinModelPortal	B1VNM0.
ModBase	Search...
Protein-protein interaction databases
STRING	B1VNM0.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6215358.
GenomeReviews	Gene locus SGR_214 in contig AP009493_GR.
KEGG	sgr:SGR_214.
PATRIC	23746759. VBIStrGri32265_0191.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG346842.
OMA	WFLHFQD.
ProtClustDB	CLSK586518.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1VNM0_STRGG

Accession

Primary (citable) accession number: B1VNM0

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)