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B1VM97 (Y3378_STRGG) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0133 protein SGR_3378
Gene names
Ordered Locus Names:SGR_3378
OrganismStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) [Complete proteome] [HAMAP]
Taxonomic identifier455632 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptomycineae › Streptomycetaceae › Streptomyces

Protein attributes

Sequence length114 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Homodimer By similarity. HAMAP MF_00274

Sequence similarities

Belongs to the UPF0133 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 114114UPF0133 protein SGR_3378 HAMAP MF_00274
PRO_1000114651

Sequences

Sequence LengthMass (Da)Tools
B1VM97 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 65F0512C1C0522CB

FASTA11411,539
        10         20         30         40         50         60 
MIPGGGQPNM QQLLQQAQKM QQDLAAAQEE LARTEVDGQA GGGLVKATVT GSGELRALVI 

        70         80         90        100        110 
DPKAVDPEDT ETLADLVVAA VQAANENAQA LQQEKLGPLA QGLGGGGGIP GLPF

« Hide

References

[1]"Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
J. Bacteriol. 190:4050-4060(2008) [PubMed: 18375553] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 4626 / NBRC 13350.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP009493 Genomic DNA. Translation: BAG20207.1.
RefSeqYP_001824890.1. NC_010572.1.

3D structure databases

ProteinModelPortalB1VM97.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1VM97.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6209975.
GenomeReviewsGene locus SGR_3378 in contig AP009493_GR.
KEGGsgr:SGR_3378.
PATRIC23753322. VBIStrGri32265_3450.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG734215.
OMAKYTKGLM.
ProtClustDBPRK00153.

Family and domain databases

HAMAPMF_00274. UPF0133.
[Tree]
InterProIPR004401. UPF0133.
[Graphical view]
Gene3DG3DSA:3.30.1310.10. CHP103. 1 hit.
KOK09747.
PfamPF02575. DUF149. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. CHP00103. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY3378_STRGG
AccessionPrimary (citable) accession number: B1VM97
Entry history
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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