Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

SGR_6488

Organism
Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-6574-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:SGR_6488Imported
OrganismiStreptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)Imported
Taxonomic identifieri455632 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
ProteomesiUP000001685 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi455632.SGR_6488.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000046158.
OMAiHARSART.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

B1VLC6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIDGAPRPA FVVQIHDARR LHFDFRLEVD GVLKSWAVPR GPSENPSDRR
60 70 80 90 100
LAVPTEDHAL EYREFEGVIP RGESGSGTVI VWDQGTYRPL GHDGSGDAVP
110 120 130 140 150
FSESLALGHA TFWLYGSKLH GEFALTRVRK GDEPDSGGHE AWLLIKANDR
160 170 180
LAVRGGPGSP DPYHARSART GRTLHQVAAA ASRGPGG
Length:187
Mass (Da):20,265
Last modified:May 20, 2008 - v1
Checksum:i09D040FC54A364FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG23317.1.
RefSeqiWP_012381979.1. NC_010572.1.

Genome annotation databases

EnsemblBacteriaiBAG23317; BAG23317; SGR_6488.
GeneIDi6210372.
KEGGisgr:SGR_6488.
PATRICi23759849. VBIStrGri32265_6653.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009493 Genomic DNA. Translation: BAG23317.1.
RefSeqiWP_012381979.1. NC_010572.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi455632.SGR_6488.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAG23317; BAG23317; SGR_6488.
GeneIDi6210372.
KEGGisgr:SGR_6488.
PATRICi23759849. VBIStrGri32265_6653.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000046158.
OMAiHARSART.
OrthoDBiEOG661H49.

Enzyme and pathway databases

BioCyciSGRI455632:GD3A-6574-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350."
    Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H., Yamashita A., Hattori M., Horinouchi S.
    J. Bacteriol. 190:4050-4060(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 4626 / NBRC 13350Imported.

Entry informationi

Entry nameiB1VLC6_STRGG
AccessioniPrimary (citable) accession number: B1VLC6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: July 22, 2015
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.