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Protein
Submitted name:

Type I restriction-modification system, specificity subunit

Gene

hsdS4

Organism
Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro

GO - Biological processi

  1. DNA modification Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCURE504474:GJ8Y-1293-MONOMER.

Protein family/group databases

REBASEi17666. S.CurORF1265P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type I restriction-modification system, specificity subunitImported
Gene namesi
Name:hsdS4Imported
Ordered Locus Names:cu1264Imported
OrganismiCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109)Imported
Taxonomic identifieri504474 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeCorynebacteriaceaeCorynebacterium
ProteomesiUP000001727: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi504474.cur_1264.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0732.
KOiK01154.
OrthoDBiEOG6MM1R7.

Family and domain databases

InterProiIPR000055. Restrct_endonuc_typeI_HsdS.
[Graphical view]
PfamiPF01420. Methylase_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1VHI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHSHNVPALR LDGFEDEWEE KTVQQISVPV ARVNPDSTAP VMMISAADGF
60 70 80 90 100
INQSEKYSSD NAGKSLSKYI ELHQGELAYN HGASKIRPFG SCFELRESAA
110 120 130 140 150
RVPFVYHCFR VPEEHPTFTS YSLNRKSVQS QLERLVSSGA RMDGLLNISF
160 170 180 190 200
PQYGTVTAYF PTLEEQQAIG AIFTNLDAAI NQHSKKHQAL QQAKTALMQR
210 220 230 240 250
MFPQEGQTVP ELRLEGFDGE WKTTTLGELG SFKSGVGFPE REQGGDTGLP
260 270 280 290 300
FYKVSDLSAP GNELQLRSAN HYVTEEQIVR NHWIPVTAVP AILFAKVGAA
310 320 330 340 350
VFLGRKRLAT DTFLLDNNLM AFSLDTKSWD VQFADTYLKT VDLTRFTQSG
360 370 380 390 400
ALPSLNARHL AEAAATIPPT LEEQQAIGAV FTRLDTLIAT EAKYIESLKQ
410
TKTALLQRMY I
Length:411
Mass (Da):45,698
Last modified:May 20, 2008 - v1
Checksum:iFE6CDC6DF43CC6A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM942444 Genomic DNA. Translation: CAQ05224.1.
RefSeqiYP_001800658.1. NC_010545.1.

Genome annotation databases

EnsemblBacteriaiCAQ05224; CAQ05224; cu1264.
GeneIDi6184786.
KEGGicur:cur_1264.
PATRICi21522286. VBICorUre58120_1266.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM942444 Genomic DNA. Translation: CAQ05224.1.
RefSeqiYP_001800658.1. NC_010545.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi504474.cur_1264.

Protein family/group databases

REBASEi17666. S.CurORF1265P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ05224; CAQ05224; cu1264.
GeneIDi6184786.
KEGGicur:cur_1264.
PATRICi21522286. VBICorUre58120_1266.

Phylogenomic databases

eggNOGiCOG0732.
KOiK01154.
OrthoDBiEOG6MM1R7.

Enzyme and pathway databases

BioCyciCURE504474:GJ8Y-1293-MONOMER.

Family and domain databases

InterProiIPR000055. Restrct_endonuc_typeI_HsdS.
[Graphical view]
PfamiPF01420. Methylase_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing."
    Tauch A., Trost E., Tilker A., Ludewig U., Schneiker S., Goesmann A., Arnold W., Bekel T., Brinkrolf K., Brune I., Goetker S., Kalinowski J., Kamp P.-B., Lobo F.P., Viehoever P., Weisshaar B., Soriano F., Droege M., Puehler A.
    J. Biotechnol. 136:11-21(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43042 / DSM 7109Imported.

Entry informationi

Entry nameiB1VHI3_CORU7
AccessioniPrimary (citable) accession number: B1VHI3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 4, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.