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B1VFW3 (B1VFW3_CORU7) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase HAMAP MF_00123
EC=6.1.1.19 HAMAP MF_00123
Alternative name(s):
Arginyl-tRNA synthetase HAMAP MF_00123
Gene names
Name:argS HAMAP MF_00123
Ordered Locus Names:cu0692
OrganismCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109) [Complete proteome] [HAMAP]
Taxonomic identifier504474 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium

Protein attributes

Sequence length569 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP MF_00123

Subunit structure

Monomer By similarity. HAMAP MF_00123

Subcellular location

Cytoplasm By similarity HAMAP MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00123 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif145 – 15511"HIGH" region By similarity HAMAP MF_00123

Sequences

Sequence LengthMass (Da)Tools
B1VFW3 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 0693C593BD9B45EF

FASTA56961,726
        10         20         30         40         50         60 
MGATNPHYVL IKSLGVTPAE LSEFIARIAR EVLTERGLDA SVVPDNPTVE RPRNPEHGDY 

        70         80         90        100        110        120 
ATNVAMQTAK KAGTNPRELG TWLAEKLAAS PEIDEASVAG PGFINIRLAA AAQGKIVENI 

       130        140        150        160        170        180 
LAAGQDFGRG DAYKGTKINL EFVSANPTGP IHLGGTRWAA VGDSLGRLLA AQGGEVTREY 

       190        200        210        220        230        240 
YFNDHGGQID RFAKSLLAAA RNEPTPEDGY GGQYIQDIAA QVVEANPTWG ELSDADAQEL 

       250        260        270        280        290        300 
FRAQGVELMF DHIKTTLKQF GTEFDVFFHE NSLFESGAVD KAIEELKSNG NLYEADGAWW 

       310        320        330        340        350        360 
LRSSDFGDDK DRVVIKSDGN AAYIAGDIAY IADKINRGHD LCIYMLGADH HGYIARLQAA 

       370        380        390        400        410        420 
AAALGYDPQQ VEVMIGQMVN LVRDGEAVRM SKRAGTIITL DDLVEAIGVD AARYALIRSS 

       430        440        450        460        470        480 
VDSSLDIDMD LWASQSNENP VFYVQYAHAR LCSLQRKADE QGVDFAGADL SLLTHDREGT 

       490        500        510        520        530        540 
LIRSLGEFPK VVRTAAELRE PHRIAHYAEK LAGDFHRFYD ACQVLPKADE PTGTDAAPVF 

       550        560 
HARLALAAAT RQVLENALSL VGVSAPERM

« Hide

References

[1]"The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing."
Tauch A., Trost E., Tilker A., Ludewig U., Schneiker S., Goesmann A., Arnold W., Bekel T., Brinkrolf K., Brune I., Goetker S., Kalinowski J., Kamp P.-B., Lobo F.P., Viehoever P., Weisshaar B., Soriano F., Droege M., Puehler A.
J. Biotechnol. 136:11-21(2008) [PubMed: 18367281] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43042 / DSM 7109.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM942444 Genomic DNA. Translation: CAQ04652.1.
RefSeqYP_001800086.1. NC_010545.1.

3D structure databases

ProteinModelPortalB1VFW3.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1VFW3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6185855.
GenomeReviewsGene locus cu0692 in contig AM942444_GR.
KEGGcur:cur_0692.
PATRIC21521106. VBICorUre58120_0692.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG695395.
OMAFDVYFHE.
ProtClustDBPRK01611.

Family and domain databases

HAMAPMF_00123. Arg_tRNA_synth.
[Tree]
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-synth_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
Gene3DG3DSA:3.30.1360.70. Arg-tRNA-synth_Ic_N. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KOK01887.
PANTHERPTHR11956. Arg_tRNA-synt_1c. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMsTIGR00456. ArgS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1VFW3_CORU7
AccessionPrimary (citable) accession number: B1VFW3
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info