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B1VFJ9 (B1VFJ9_CORU7) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Peptidyl-tRNA hydrolase HAMAP MF_00083
Short name=PTH HAMAP MF_00083
EC=3.1.1.29 HAMAP MF_00083
Gene names
Name:pth HAMAP MF_00083
Ordered Locus Names:cu0578
OrganismCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109) [Complete proteome] [HAMAP]
Taxonomic identifier504474 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium

Protein attributes

Sequence length215 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00083

Catalytic activity

N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083 RuleBase RU000673

Subunit structure

Monomer By similarity. HAMAP MF_00083

Subcellular location

Cytoplasm By similarity HAMAP MF_00083.

Sequence similarities

Belongs to the PTH family. HAMAP MF_00083 RuleBase RU004320

Ontologies

Keywords
   Cellular componentCytoplasm HAMAP MF_00083
   Molecular functionHydrolase HAMAP MF_00083 RuleBase RU000673 EMBL CAQ04538.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionaminoacyl-tRNA hydrolase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1VFJ9 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 53B685FF1F911013

FASTA21523,056
        10         20         30         40         50         60 
MCGKLKNSSP KRTPKSAGSA DAPWLVVGLG NPGAQYETTR HNIGYLAVDE LLDDLTPMPG 

        70         80         90        100        110        120 
TLSAHKRTNS LICQTKIDGR SVIIARARSY MNLSGGAIGA LAKFFKIPAE HVIVIHDELD 

       130        140        150        160        170        180 
LDPAAVRIKV GGGENGHNGL KSTTQALGTR DYVRIRMGIG RPPGRMDPAS FVLKPFSKQE 

       190        200        210 
LEWLPLSLGD AADAVRLTVS RGVAIAQNEI HGRSR

« Hide

References

[1]"The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing."
Tauch A., Trost E., Tilker A., Ludewig U., Schneiker S., Goesmann A., Arnold W., Bekel T., Brinkrolf K., Brune I., Goetker S., Kalinowski J., Kamp P.-B., Lobo F.P., Viehoever P., Weisshaar B., Soriano F., Droege M., Puehler A.
J. Biotechnol. 136:11-21(2008) [PubMed: 18367281] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43042 / DSM 7109.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM942444 Genomic DNA. Translation: CAQ04538.1.
RefSeqYP_001799972.1. NC_010545.1.

3D structure databases

ProteinModelPortalB1VFJ9.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1VFJ9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6184847.
GenomeReviewsGene locus cu0578 in contig AM942444_GR.
KEGGcur:cur_0578.
PATRIC21520872. VBICorUre58120_0578.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG610927.
OMAIKFKTGG.
ProtClustDBCLSK2507008.

Family and domain databases

HAMAPMF_00083. Pept_tRNA_hydro_bact.
[Tree]
InterProIPR001328. Pept_tRNA_hydro.
IPR018171. Pept_tRNA_hydro_CS.
[Graphical view]
Gene3DG3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit.
KOK01056.
PANTHERPTHR17224. Pept_tRNA_hydro. 1 hit.
PfamPF01195. Pept_tRNA_hydro. 1 hit.
[Graphical view]
SUPFAMSSF53178. Pept_tRNA_hydro. 1 hit.
TIGRFAMsTIGR00447. Pth. 1 hit.
PROSITEPS01195. PEPT_TRNA_HYDROL_1. 1 hit.
PS01196. PEPT_TRNA_HYDROL_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1VFJ9_CORU7
AccessionPrimary (citable) accession number: B1VFJ9
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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