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Protein
Submitted name:

Putative tRNA and rRNA cytosine-C5-methylase

Gene

cu0979

Organism
Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative tRNA and rRNA cytosine-C5-methylaseImported
Gene namesi
Ordered Locus Names:cu0979Imported
OrganismiCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109)Imported
Taxonomic identifieri504474 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000001727 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi504474.cur_0979.

Structurei

3D structure databases

ProteinModelPortaliB1VDP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini219 – 513SAM_MT_RSMB_NOPInterPro annotationAdd BLAST295

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1VDP1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSFRSRSES ARSGKARPNT ASRGTGRAKQ RESGRARGYQ QRRPEHRQEK
60 70 80 90 100
SRRAGTGDKA RDAAFAVLRQ VTEEDAYGNL ALPAVLRERG ISGRDANFAT
110 120 130 140 150
ELTYGTLRAT GLLDAIIAKA AGRPVAKIDS VALDALRIGA YQLLRTRVEP
160 170 180 190 200
HAAVDTSVEL VKANGGGKAS GFVNGVLRTI SRSTPEQWLD RVAPGSDLAN
210 220 230 240 250
MALRYAHPEW IAAAFNQSLG GSSEKPAADL AEALEADDAR PTVHLAARPG
260 270 280 290 300
QISAEELALI TGGEQGRWSD YAVYLDSGAP GELEAITQGL ASVQDEGSQL
310 320 330 340 350
ISLALVQAPL GREDRGRWLD LCAGPGGKTA FIGSWAQAEQ ATVDATEISA
360 370 380 390 400
HRAELVAKST KELPVRVRTG DGRNLAGVRD LELPEEGFDR VLVDAPCTGL
410 420 430 440 450
GALRRRPEAR WRKQETDVTE LVPLQRELLR SAWEATAPGG VVIYSTCSPH
460 470 480 490 500
PLETTQLVDS FCRDTGAEPI DLGAEVPALA AAAAAGGAVG PYIQLWPHRH
510
GTDAMFIAGI RKA
Length:513
Mass (Da):54,678
Last modified:May 20, 2008 - v1
Checksum:i015E13E8E1B40B91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM942444 Genomic DNA. Translation: CAQ04939.1.
RefSeqiWP_012360227.1. NC_010545.1.

Genome annotation databases

EnsemblBacteriaiCAQ04939; CAQ04939; cu0979.
KEGGicur:cu0979.
PATRICi21521694. VBICorUre58120_0976.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM942444 Genomic DNA. Translation: CAQ04939.1.
RefSeqiWP_012360227.1. NC_010545.1.

3D structure databases

ProteinModelPortaliB1VDP1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi504474.cur_0979.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAQ04939; CAQ04939; cu0979.
KEGGicur:cu0979.
PATRICi21521694. VBICorUre58120_0976.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1VDP1_CORU7
AccessioniPrimary (citable) accession number: B1VDP1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 30, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.