Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative tRNA and rRNA cytosine-C5-methylase

Gene

cu0979

Organism
Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei347S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei371S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei394S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei447NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative tRNA and rRNA cytosine-C5-methylaseImported
Gene namesi
Ordered Locus Names:cu0979Imported
OrganismiCorynebacterium urealyticum (strain ATCC 43042 / DSM 7109)Imported
Taxonomic identifieri504474 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000001727 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi504474.cur_0979.

Structurei

3D structure databases

ProteinModelPortaliB1VDP1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini219 – 513SAM_MT_RSMB_NOPInterPro annotationAdd BLAST295

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
InterProiView protein in InterPro
IPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
PfamiView protein in Pfam
PF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiView protein in PROSITE
PS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.

Sequencei

Sequence statusi: Complete.

B1VDP1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSFRSRSES ARSGKARPNT ASRGTGRAKQ RESGRARGYQ QRRPEHRQEK
60 70 80 90 100
SRRAGTGDKA RDAAFAVLRQ VTEEDAYGNL ALPAVLRERG ISGRDANFAT
110 120 130 140 150
ELTYGTLRAT GLLDAIIAKA AGRPVAKIDS VALDALRIGA YQLLRTRVEP
160 170 180 190 200
HAAVDTSVEL VKANGGGKAS GFVNGVLRTI SRSTPEQWLD RVAPGSDLAN
210 220 230 240 250
MALRYAHPEW IAAAFNQSLG GSSEKPAADL AEALEADDAR PTVHLAARPG
260 270 280 290 300
QISAEELALI TGGEQGRWSD YAVYLDSGAP GELEAITQGL ASVQDEGSQL
310 320 330 340 350
ISLALVQAPL GREDRGRWLD LCAGPGGKTA FIGSWAQAEQ ATVDATEISA
360 370 380 390 400
HRAELVAKST KELPVRVRTG DGRNLAGVRD LELPEEGFDR VLVDAPCTGL
410 420 430 440 450
GALRRRPEAR WRKQETDVTE LVPLQRELLR SAWEATAPGG VVIYSTCSPH
460 470 480 490 500
PLETTQLVDS FCRDTGAEPI DLGAEVPALA AAAAAGGAVG PYIQLWPHRH
510
GTDAMFIAGI RKA
Length:513
Mass (Da):54,678
Last modified:May 20, 2008 - v1
Checksum:i015E13E8E1B40B91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM942444 Genomic DNA. Translation: CAQ04939.1.
RefSeqiWP_012360227.1. NC_010545.1.

Genome annotation databases

EnsemblBacteriaiCAQ04939; CAQ04939; cu0979.
KEGGicur:cu0979.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiB1VDP1_CORU7
AccessioniPrimary (citable) accession number: B1VDP1
Entry historyiIntegrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: June 7, 2017
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported