B1VAS4 (B1VAS4_PHYAS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Thymidine kinase HAMAP MF_00124 RuleBase RU000544
EC=2.7.1.21 HAMAP MF_00124 RuleBase RU000544

Gene names

Name:	tdk HAMAP MF_00124 EMBL CAM12047.1
Ordered Locus Names:	PA0713

Organism

Phytoplasma australiense [Complete proteome] [HAMAP]

Taxonomic identifier

59748 [NCBI]

Taxonomic lineage

Bacteria › Tenericutes › Mollicutes › Acholeplasmatales › Acholeplasmataceae › Candidatus Phytoplasma › 16SrXII (Stolbur group)

Protein attributes

Sequence length	199 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP MF_00124 RuleBase RU000544 SAAS SAAS020634
Subunit structure	Homotetramer By similarity. HAMAP MF_00124
Subcellular location	Cytoplasm By similarity HAMAP MF_00124.
Sequence similarities	Belongs to the thymidine kinase family. HAMAP MF_00124 RuleBase RU004165

Ontologies

Keywords
Biological process	DNA synthesis HAMAP MF_00124 RuleBase RU000544 SAAS SAAS020634
Cellular component	Cytoplasm HAMAP MF_00124
Ligand	ATP-binding HAMAP MF_00124 RuleBase RU000544 SAAS SAAS020634 Nucleotide-binding
Molecular function	Kinase HAMAP MF_00124 RuleBase RU000544 SAAS SAAS020634 EMBL CAM12047.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP thymidine kinase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	14 – 21	8	ATP By similarity HAMAP MF_00124
	Nucleotide binding	88 – 91	4	ATP By similarity HAMAP MF_00124
Sites
	Active site	89	1	Proton acceptor By similarity HAMAP MF_00124

Sequences

	Sequence		Length	Mass (Da)
	B1VAS4 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 69449E73F2E74516	FASTA	199	22,397
	10 20 30 40 50 60 MPKEQQGFIE VICGPMFAGK TEALIKRYQE AQKLKKNILS FKPRIDNRYS SEGFIVSHSQ 70 80 90 100 110 120 NKFPAILIDQ SRDILPFVTP ETDLIIIDEV QFLDNDIFGI VDYLANQNIQ IILAGLDLDF 130 140 150 160 170 180 KGKPFGPMPY LLALAEVVTK LTAICAVSGK KATKTQRLIN GKPAKSNDST ILVGGQEYHE 190 PRCRRHHELL DVDKKTINL

References

[1]	"Comparative genome analysis of "Candidatus Phytoplasma australiense" (subgroup tuf-Australia I; rp-A) and "Ca. Phytoplasma asteris" Strains OY-M and AY-WB." Tran-Nguyen L.T., Kube M., Schneider B., Reinhardt R., Gibb K.S. J. Bacteriol. 190:3979-3991(2008) Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM422018 Genomic DNA. Translation: CAM12047.1.
RefSeq	YP_001799288.1. NC_010544.1.
3D structure databases
ProteinModelPortal	B1VAS4.
ModBase	Search...
Protein-protein interaction databases
STRING	B1VAS4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6799105.
GenomeReviews	Gene locus PA0713 in contig AM422018_GR.
PATRIC	31993852. VBICanPhy111091_0781.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG522108.
OMA	EPRCRHH.
PhylomeDB	B1VAS4.
ProtClustDB	PRK04296.
Family and domain databases
HAMAP	MF_00124. Thymidine_kinase. [Tree]
InterPro	IPR001267. Thymidine_kinase. IPR020634. Thymidine_kinase_subgr. [Graphical view]
PANTHER	PTHR11441. TK_cell. 1 hit.
Pfam	PF00265. TK. 1 hit. [Graphical view]
PIRSF	PIRSF035805. TK_cell. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1VAS4_PHYAS

Accession

Primary (citable) accession number: B1VAS4

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)