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B1VAS4

- B1VAS4_PHYAS

UniProt

B1VAS4 - B1VAS4_PHYAS

Protein

Thymidine kinase

Gene

tdk

Organism
Phytoplasma australiense
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + thymidine = ADP + thymidine 5'-phosphate.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei89 – 891Proton acceptorUniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi14 – 218ATPUniRule annotation
    Nucleotide bindingi88 – 914ATPUniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-HAMAP
    2. thymidine kinase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    KinaseUniRule annotationSAAS annotationImported, Transferase

    Keywords - Biological processi

    DNA synthesisUniRule annotationSAAS annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciPAUS59748:GJ8P-732-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Thymidine kinaseUniRule annotation (EC:2.7.1.21UniRule annotation)
    Gene namesi
    Name:tdkUniRule annotationImported
    Ordered Locus Names:PA0713Imported
    OrganismiPhytoplasma australienseImported
    Taxonomic identifieri59748 [NCBI]
    Taxonomic lineageiBacteriaTenericutesMollicutesAcholeplasmatalesAcholeplasmataceaeCandidatus Phytoplasma16SrXII (Stolbur group)
    ProteomesiUP000008323: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi59748.PAa_0713.

    Structurei

    3D structure databases

    ProteinModelPortaliB1VAS4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the thymidine kinase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1435.
    HOGENOMiHOG000247575.
    KOiK00857.
    OMAiDHISEST.
    OrthoDBiEOG69D3J2.

    Family and domain databases

    HAMAPiMF_00124. Thymidine_kinase.
    InterProiIPR027417. P-loop_NTPase.
    IPR001267. Thymidine_kinase.
    IPR020634. Thymidine_kinase_subgr.
    [Graphical view]
    PANTHERiPTHR11441. PTHR11441. 1 hit.
    PfamiPF00265. TK. 1 hit.
    [Graphical view]
    PIRSFiPIRSF035805. TK_cell. 1 hit.
    SUPFAMiSSF52540. SSF52540. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B1VAS4-1 [UniParc]FASTAAdd to Basket

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    MPKEQQGFIE VICGPMFAGK TEALIKRYQE AQKLKKNILS FKPRIDNRYS    50
    SEGFIVSHSQ NKFPAILIDQ SRDILPFVTP ETDLIIIDEV QFLDNDIFGI 100
    VDYLANQNIQ IILAGLDLDF KGKPFGPMPY LLALAEVVTK LTAICAVSGK 150
    KATKTQRLIN GKPAKSNDST ILVGGQEYHE PRCRRHHELL DVDKKTINL 199
    Length:199
    Mass (Da):22,397
    Last modified:May 20, 2008 - v1
    Checksum:i69449E73F2E74516
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM422018 Genomic DNA. Translation: CAM12047.1.
    RefSeqiWP_012359175.1. NC_010544.1.
    YP_001799288.1. NC_010544.1.

    Genome annotation databases

    EnsemblBacteriaiCAM12047; CAM12047; EBG00000299115.
    GeneIDi6799105.
    KEGGipal:PAa_0713.
    PATRICi31993852. VBICanPhy111091_0781.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM422018 Genomic DNA. Translation: CAM12047.1 .
    RefSeqi WP_012359175.1. NC_010544.1.
    YP_001799288.1. NC_010544.1.

    3D structure databases

    ProteinModelPortali B1VAS4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 59748.PAa_0713.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAM12047 ; CAM12047 ; EBG00000299115 .
    GeneIDi 6799105.
    KEGGi pal:PAa_0713.
    PATRICi 31993852. VBICanPhy111091_0781.

    Phylogenomic databases

    eggNOGi COG1435.
    HOGENOMi HOG000247575.
    KOi K00857.
    OMAi DHISEST.
    OrthoDBi EOG69D3J2.

    Enzyme and pathway databases

    BioCyci PAUS59748:GJ8P-732-MONOMER.

    Family and domain databases

    HAMAPi MF_00124. Thymidine_kinase.
    InterProi IPR027417. P-loop_NTPase.
    IPR001267. Thymidine_kinase.
    IPR020634. Thymidine_kinase_subgr.
    [Graphical view ]
    PANTHERi PTHR11441. PTHR11441. 1 hit.
    Pfami PF00265. TK. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF035805. TK_cell. 1 hit.
    SUPFAMi SSF52540. SSF52540. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genome analysis of 'Candidatus Phytoplasma australiense' (subgroup tuf-Australia I; rp-A) and 'Ca. Phytoplasma asteris' strains OY-M and AY-WB."
      Tran-Nguyen L.T., Kube M., Schneider B., Reinhardt R., Gibb K.S.
      J. Bacteriol. 190:3979-3991(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiB1VAS4_PHYAS
    AccessioniPrimary (citable) accession number: B1VAS4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3