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Protein

Ribonuclease P protein component

Gene

rnpA

Organism
Clostridium perfringens D str. JGS1721
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.UniRule annotationSAAS annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionEndonucleaseUniRule annotationSAAS annotation, Hydrolase, Nuclease, RNA-bindingUniRule annotationSAAS annotation
Biological processtRNA processingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein componentUniRule annotationSAAS annotation (EC:3.1.26.5UniRule annotationSAAS annotation)
Short name:
RNase P proteinUniRule annotation
Short name:
RNaseP proteinUniRule annotation
Alternative name(s):
Protein C5UniRule annotation
Gene namesi
Name:rnpAUniRule annotationImported
ORF Names:CJD_3317Imported
OrganismiClostridium perfringens D str. JGS1721Imported
Taxonomic identifieri488537 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000003188 Componenti: Unassembled WGS sequence

Interactioni

Subunit structurei

Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliB1V5Q5.
SMRiB1V5Q5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RnpA family.UniRule annotationSAAS annotation

Family and domain databases

Gene3Di3.30.230.10. 1 hit.
HAMAPiMF_00227. RNase_P. 1 hit.
InterProiView protein in InterPro
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000100. RNase_P.
PANTHERiPTHR33992. PTHR33992. 1 hit.
PfamiView protein in Pfam
PF00825. Ribonuclease_P. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003629. Ribonuclease_P. 1 hit.
SUPFAMiSSF54211. SSF54211. 1 hit.
TIGRFAMsiTIGR00188. rnpA. 1 hit.

Sequencei

Sequence statusi: Complete.

B1V5Q5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLSLRKNNE FRTVYRRGKS YANDLLVLYV YPNRKNVTKD GERFNKVGVS
60 70 80 90 100
VSKKVGKSVV RSRVKRLILE NYRLNSSELK EGYDFVFIAR VAINGKDFKQ
110 120
VGKAMNNLIK KAGLRDNEKI VHSND
Length:125
Mass (Da):14,440
Last modified:May 20, 2008 - v1
Checksum:i3EC5294D99C4E64E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABOO01000036 Genomic DNA. Translation: EDT70854.1.
RefSeqiWP_003450986.1. NZ_ABOO01000036.1.

Genome annotation databases

EnsemblBacteriaiEDT70854; EDT70854; CJD_3317.
GeneIDi29569887.

Similar proteinsi

Entry informationi

Entry nameiB1V5Q5_CLOPF
AccessioniPrimary (citable) accession number: B1V5Q5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: September 27, 2017
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported