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Protein
Submitted name:

Branched chain keto acid dehydrogenase E1 beta polypeptide

Gene
N/A
Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Branched chain keto acid dehydrogenase E1 beta polypeptideImported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

PTM / Processingi

Proteomic databases

PaxDbiB1PK11.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004815.

Structurei

3D structure databases

ProteinModelPortaliB1PK11.
SMRiB1PK11. Positions 68-396.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini75 – 250176Transket_pyrInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0525. Eukaryota.
COG0022. LUCA.
HOGENOMiHOG000281451.
HOVERGENiHBG108210.
KOiK00167.

Family and domain databases

Gene3Di3.40.50.920. 1 hit.
3.40.50.970. 1 hit.
InterProiIPR029061. THDP-binding.
IPR009014. Transketo_C/PFOR_II.
IPR005475. Transketolase-like_Pyr-bd.
IPR033248. Transketolase_C.
IPR033247. Transketolase_fam.
[Graphical view]
PANTHERiPTHR11624. PTHR11624. 1 hit.
PfamiPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 1 hit.
SSF52922. SSF52922. 1 hit.

Sequencei

Sequence statusi: Complete.

B1PK11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAVAAAAAV AVGRLLRLRV ARVEGHWHPL SGGGLLRGFL QPASADGDAA
60 70 80 90 100
QKRQVAHFTF QPDPETVEYG QTQKMNLFQA VTSALDNSLA KDPTAVIFGE
110 120 130 140 150
DVAFGGVFRC TVGLRDKYGK DRVFNTPLCE QGIVGFGIGI AVTGATAIAE
160 170 180 190 200
IQFADYIFPA FDQIVNEAAK YRYRSGDLFN CGSLTIRSPW GCVGHGALYH
210 220 230 240 250
SQSPEAFFAH CPGIKVVVPR SPFQAKGLLL SCIEDKNPCI FFEPKILYRA
260 270 280 290 300
AVEQVPIEPY TIPLSQAEVI QEGSDVTLVA WGTQVHVIRE VASMAREKLG
310 320 330 340 350
VSCEVIDLRT IIPWDVDTVC KSAIKTGRLL VSHEAPLTGG FASEISSTVQ
360 370 380 390
EECFLNLEAP ISRVCGYDTP FPHIFEPFYI PDKWKCYDAL RKMINY
Length:396
Mass (Da):43,296
Last modified:April 29, 2008 - v1
Checksum:iF19E0EA11D2EAA39
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU442568 mRNA. Translation: ACA43008.1.
RefSeqiNP_001116691.1. NM_001123219.1.
UniGeneiSsc.3339.
Ssc.82620.

Genome annotation databases

GeneIDi100142669.
KEGGissc:100142669.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU442568 mRNA. Translation: ACA43008.1.
RefSeqiNP_001116691.1. NM_001123219.1.
UniGeneiSsc.3339.
Ssc.82620.

3D structure databases

ProteinModelPortaliB1PK11.
SMRiB1PK11. Positions 68-396.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004815.

Proteomic databases

PaxDbiB1PK11.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100142669.
KEGGissc:100142669.

Organism-specific databases

CTDi594.

Phylogenomic databases

eggNOGiKOG0525. Eukaryota.
COG0022. LUCA.
HOGENOMiHOG000281451.
HOVERGENiHBG108210.
KOiK00167.

Family and domain databases

Gene3Di3.40.50.920. 1 hit.
3.40.50.970. 1 hit.
InterProiIPR029061. THDP-binding.
IPR009014. Transketo_C/PFOR_II.
IPR005475. Transketolase-like_Pyr-bd.
IPR033248. Transketolase_C.
IPR033247. Transketolase_fam.
[Graphical view]
PANTHERiPTHR11624. PTHR11624. 1 hit.
PfamiPF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 1 hit.
SSF52922. SSF52922. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Shu X., Liu Y.G.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Isolation, sequence identification, and tissue expression profile of 3 novel porcine genes: NCF2, BCKDHB and BCKDHA."
    Liu G.Y.
    J. Appl. Genet. 50:47-50(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiB1PK11_PIG
AccessioniPrimary (citable) accession number: B1PK11
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 11, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.