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B1N0C6 (B1N0C6_LEUCK) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=5.99.1.2 EMBL ACA83228.1
Gene names
Ordered Locus Names:LCK_01404 EMBL ACA83228.1
OrganismLeuconostoc citreum (strain KM20) [Complete proteome] [HAMAP] EMBL ACA83228.1
Taxonomic identifier349519 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeLeuconostoc

Protein attributes

Sequence length692 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type IA topoisomerase family. RuleBase RU004206

Ontologies

Keywords
   Molecular functionIsomerase EMBL ACA83228.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA topological change

Inferred from electronic annotation. Source: InterPro

   Cellular_componentchromosome

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

DNA topoisomerase type I activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1N0C6 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: F9AE643BC5206633

FASTA69277,907
        10         20         30         40         50         60 
MPNYLILTEK PSAAANFVKA LGGKNGQFDT FTYTITNLRG HVMTLKDPEE MVSEDLKKQY 

        70         80         90        100        110        120 
KSWLIKHLPW NLNDFNWART YIRQRNLRTG KVASTKQLVD DLKKEAANGY DAIVIATDTD 

       130        140        150        160        170        180 
PSGEGELLAW EALEAIKWRG QVLRANFMDE SVKGIQTSMQ HLRDVSDKNQ DGEYIKGESR 

       190        200        210        220        230        240 
NRWDFASMQL TRIATTAAKK QGFKVVAREG RLKSVIVWQI YAQLEAIKRY VKKPYFEVKF 

       250        260        270        280        290        300 
KDLAGHIFGR ITPEGDVIPW RFDSKAVAQQ DLLQYHESAV TNERYQTRTQ APGKLLDLAG 

       310        320        330        340        350        360 
LAAILAPRGF SAKEVLSTYQ KMYEAQVVSY PRTEDKTVTP EQFNELLPKI DQIAQVVHVD 

       370        380        390        400        410        420 
TALLTHRQPR ATHVKNQGAH GANRPGENVP TDLATLTKFG ASAQAIYEVL AKNYLAMLAE 

       430        440        450        460        470        480 
DYVYDHVTAN LTDYPIFKTA YNVPVQLNFK AVYDSQRAIK VDDDDETAVM GQLGPTAQPY 

       490        500        510        520        530        540 
LYEGANKKPQ APSTKWIMAF LEKHNVGTGA TRVSTLSDMS RGTKAMIKET RGKLTLTETG 

       550        560        570        580        590        600 
NVSAVMVKGT WIASPKITKR LFEMMDQVGR FEMTMPKLLD SVTQVVVHDM PIMVANAEQL 

       610        620        630        640        650        660 
ETLLGQPKIK PKRPVSEKTT GQFKGEEITF AKEWSGHVFT DEELTKLLNG AEISFEAKSK 

       670        680        690 
RGKLYTATGT MAKQTYKGRT FYGFKLKPKP KK 

« Hide

References

[1]"Complete genome sequence of Leuconostoc citreum KM20."
Kim J.F., Jeong H., Lee J.S., Choi S.H., Ha M., Hur C.G., Kim J.S., Lee S., Park H.S., Park Y.H., Oh T.K.
J. Bacteriol. 190:3093-3094(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KM20 EMBL ACA83228.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DQ489736 Genomic DNA. Translation: ACA83228.1.
RefSeqYP_001728672.1. NC_010471.1.

3D structure databases

ProteinModelPortalB1N0C6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING349519.LCK_01404.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA83228; ACA83228; LCK_01404.
GeneID6062554.
KEGGlci:LCK_01404.
PATRIC32616120. VBILeuCit37309_1534.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0550.
HOGENOMHOG000052482.
KOK03169.
OMAWIMAFLE.
OrthoDBEOG6TJ7VF.

Enzyme and pathway databases

BioCycLCIT349519:GHNF-1427-MONOMER.

Family and domain databases

Gene3D1.10.290.10. 1 hit.
1.10.460.10. 2 hits.
3.40.50.140. 1 hit.
InterProIPR000380. Topo_IA.
IPR013497. Topo_IA_cen.
IPR013824. Topo_IA_cen_sub1.
IPR013826. Topo_IA_cen_sub3.
IPR023405. Topo_IA_core_domain.
IPR006171. Toprim_domain.
[Graphical view]
PfamPF01131. Topoisom_bac. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
PRINTSPR00417. PRTPISMRASEI.
SMARTSM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMSSF56712. SSF56712. 1 hit.
PROSITEPS50880. TOPRIM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1N0C6_LEUCK
AccessionPrimary (citable) accession number: B1N0C6
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: July 9, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)