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B1N0C6

- B1N0C6_LEUCK

UniProt

B1N0C6 - B1N0C6_LEUCK

Protein
Submitted name:

Topoisomerase IA

Gene

LCK_01404

Organism
Leuconostoc citreum (strain KM20)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA topoisomerase type I activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA topological change Source: InterPro

    Keywords - Molecular functioni

    IsomeraseImported

    Enzyme and pathway databases

    BioCyciLCIT349519:GHNF-1427-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Topoisomerase IAImported (EC:5.99.1.2Imported)
    Gene namesi
    Ordered Locus Names:LCK_01404Imported
    OrganismiLeuconostoc citreum (strain KM20)Imported
    Taxonomic identifieri349519 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeLeuconostoc
    ProteomesiUP000002166: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. chromosome Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi349519.LCK_01404.

    Structurei

    3D structure databases

    ProteinModelPortaliB1N0C6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the type IA topoisomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0550.
    HOGENOMiHOG000052482.
    KOiK03169.
    OMAiWIMAFLE.
    OrthoDBiEOG6TJ7VF.

    Family and domain databases

    Gene3Di1.10.290.10. 1 hit.
    1.10.460.10. 2 hits.
    3.40.50.140. 1 hit.
    InterProiIPR000380. Topo_IA.
    IPR013497. Topo_IA_cen.
    IPR013824. Topo_IA_cen_sub1.
    IPR013826. Topo_IA_cen_sub3.
    IPR023405. Topo_IA_core_domain.
    IPR006171. Toprim_domain.
    [Graphical view]
    PfamiPF01131. Topoisom_bac. 1 hit.
    PF01751. Toprim. 1 hit.
    [Graphical view]
    PRINTSiPR00417. PRTPISMRASEI.
    SMARTiSM00493. TOPRIM. 1 hit.
    [Graphical view]
    SUPFAMiSSF56712. SSF56712. 1 hit.
    PROSITEiPS50880. TOPRIM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1N0C6-1 [UniParc]FASTAAdd to Basket

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    MPNYLILTEK PSAAANFVKA LGGKNGQFDT FTYTITNLRG HVMTLKDPEE    50
    MVSEDLKKQY KSWLIKHLPW NLNDFNWART YIRQRNLRTG KVASTKQLVD 100
    DLKKEAANGY DAIVIATDTD PSGEGELLAW EALEAIKWRG QVLRANFMDE 150
    SVKGIQTSMQ HLRDVSDKNQ DGEYIKGESR NRWDFASMQL TRIATTAAKK 200
    QGFKVVAREG RLKSVIVWQI YAQLEAIKRY VKKPYFEVKF KDLAGHIFGR 250
    ITPEGDVIPW RFDSKAVAQQ DLLQYHESAV TNERYQTRTQ APGKLLDLAG 300
    LAAILAPRGF SAKEVLSTYQ KMYEAQVVSY PRTEDKTVTP EQFNELLPKI 350
    DQIAQVVHVD TALLTHRQPR ATHVKNQGAH GANRPGENVP TDLATLTKFG 400
    ASAQAIYEVL AKNYLAMLAE DYVYDHVTAN LTDYPIFKTA YNVPVQLNFK 450
    AVYDSQRAIK VDDDDETAVM GQLGPTAQPY LYEGANKKPQ APSTKWIMAF 500
    LEKHNVGTGA TRVSTLSDMS RGTKAMIKET RGKLTLTETG NVSAVMVKGT 550
    WIASPKITKR LFEMMDQVGR FEMTMPKLLD SVTQVVVHDM PIMVANAEQL 600
    ETLLGQPKIK PKRPVSEKTT GQFKGEEITF AKEWSGHVFT DEELTKLLNG 650
    AEISFEAKSK RGKLYTATGT MAKQTYKGRT FYGFKLKPKP KK 692
    Length:692
    Mass (Da):77,907
    Last modified:April 29, 2008 - v1
    Checksum:iF9AE643BC5206633
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ489736 Genomic DNA. Translation: ACA83228.1.
    RefSeqiYP_001728672.1. NC_010471.1.

    Genome annotation databases

    EnsemblBacteriaiACA83228; ACA83228; LCK_01404.
    GeneIDi6062554.
    KEGGilci:LCK_01404.
    PATRICi32616120. VBILeuCit37309_1534.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ489736 Genomic DNA. Translation: ACA83228.1 .
    RefSeqi YP_001728672.1. NC_010471.1.

    3D structure databases

    ProteinModelPortali B1N0C6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 349519.LCK_01404.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACA83228 ; ACA83228 ; LCK_01404 .
    GeneIDi 6062554.
    KEGGi lci:LCK_01404.
    PATRICi 32616120. VBILeuCit37309_1534.

    Phylogenomic databases

    eggNOGi COG0550.
    HOGENOMi HOG000052482.
    KOi K03169.
    OMAi WIMAFLE.
    OrthoDBi EOG6TJ7VF.

    Enzyme and pathway databases

    BioCyci LCIT349519:GHNF-1427-MONOMER.

    Family and domain databases

    Gene3Di 1.10.290.10. 1 hit.
    1.10.460.10. 2 hits.
    3.40.50.140. 1 hit.
    InterProi IPR000380. Topo_IA.
    IPR013497. Topo_IA_cen.
    IPR013824. Topo_IA_cen_sub1.
    IPR013826. Topo_IA_cen_sub3.
    IPR023405. Topo_IA_core_domain.
    IPR006171. Toprim_domain.
    [Graphical view ]
    Pfami PF01131. Topoisom_bac. 1 hit.
    PF01751. Toprim. 1 hit.
    [Graphical view ]
    PRINTSi PR00417. PRTPISMRASEI.
    SMARTi SM00493. TOPRIM. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56712. SSF56712. 1 hit.
    PROSITEi PS50880. TOPRIM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KM20Imported.

    Entry informationi

    Entry nameiB1N0C6_LEUCK
    AccessioniPrimary (citable) accession number: B1N0C6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 29, 2008
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3