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Protein
Submitted name:

Topoisomerase IA

Gene

LCK_01404

Organism
Leuconostoc citreum (strain KM20)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseImported

Enzyme and pathway databases

BioCyciLCIT349519:GHNF-1427-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Topoisomerase IAImported (EC:5.99.1.2Imported)
Gene namesi
Ordered Locus Names:LCK_01404Imported
OrganismiLeuconostoc citreum (strain KM20)Imported
Taxonomic identifieri349519 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeLeuconostoc
Proteomesi
  • UP000002166 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349519.LCK_01404

Structurei

3D structure databases

ProteinModelPortaliB1N0C6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 151ToprimInterPro annotationAdd BLAST149

Phylogenomic databases

eggNOGiENOG4108MZ2 Bacteria
COG0550 LUCA
HOGENOMiHOG000052482
KOiK03169
OMAiKNYLAML

Family and domain databases

Gene3Di1.10.290.10, 1 hit
1.10.460.10, 2 hits
2.70.20.10, 2 hits
InterProiView protein in InterPro
IPR000380 Topo_IA
IPR013497 Topo_IA_cen
IPR013824 Topo_IA_cen_sub1
IPR013825 Topo_IA_cen_sub2
IPR013826 Topo_IA_cen_sub3
IPR023405 Topo_IA_core_domain
IPR003602 Topo_IA_DNA-bd_dom
IPR006171 TOPRIM_domain
PANTHERiPTHR11390 PTHR11390, 1 hit
PfamiView protein in Pfam
PF01131 Topoisom_bac, 1 hit
PF01751 Toprim, 1 hit
PRINTSiPR00417 PRTPISMRASEI
SMARTiView protein in SMART
SM00437 TOP1Ac, 1 hit
SM00493 TOPRIM, 1 hit
SUPFAMiSSF56712 SSF56712, 1 hit
PROSITEiView protein in PROSITE
PS50880 TOPRIM, 1 hit

Sequencei

Sequence statusi: Complete.

B1N0C6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNYLILTEK PSAAANFVKA LGGKNGQFDT FTYTITNLRG HVMTLKDPEE
60 70 80 90 100
MVSEDLKKQY KSWLIKHLPW NLNDFNWART YIRQRNLRTG KVASTKQLVD
110 120 130 140 150
DLKKEAANGY DAIVIATDTD PSGEGELLAW EALEAIKWRG QVLRANFMDE
160 170 180 190 200
SVKGIQTSMQ HLRDVSDKNQ DGEYIKGESR NRWDFASMQL TRIATTAAKK
210 220 230 240 250
QGFKVVAREG RLKSVIVWQI YAQLEAIKRY VKKPYFEVKF KDLAGHIFGR
260 270 280 290 300
ITPEGDVIPW RFDSKAVAQQ DLLQYHESAV TNERYQTRTQ APGKLLDLAG
310 320 330 340 350
LAAILAPRGF SAKEVLSTYQ KMYEAQVVSY PRTEDKTVTP EQFNELLPKI
360 370 380 390 400
DQIAQVVHVD TALLTHRQPR ATHVKNQGAH GANRPGENVP TDLATLTKFG
410 420 430 440 450
ASAQAIYEVL AKNYLAMLAE DYVYDHVTAN LTDYPIFKTA YNVPVQLNFK
460 470 480 490 500
AVYDSQRAIK VDDDDETAVM GQLGPTAQPY LYEGANKKPQ APSTKWIMAF
510 520 530 540 550
LEKHNVGTGA TRVSTLSDMS RGTKAMIKET RGKLTLTETG NVSAVMVKGT
560 570 580 590 600
WIASPKITKR LFEMMDQVGR FEMTMPKLLD SVTQVVVHDM PIMVANAEQL
610 620 630 640 650
ETLLGQPKIK PKRPVSEKTT GQFKGEEITF AKEWSGHVFT DEELTKLLNG
660 670 680 690
AEISFEAKSK RGKLYTATGT MAKQTYKGRT FYGFKLKPKP KK
Length:692
Mass (Da):77,907
Last modified:April 29, 2008 - v1
Checksum:iF9AE643BC5206633
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ489736 Genomic DNA Translation: ACA83228.1
RefSeqiWP_004906674.1, NC_010471.1

Genome annotation databases

EnsemblBacteriaiACA83228; ACA83228; LCK_01404
GeneIDi35825131
KEGGilci:LCK_01404

Similar proteinsi

Entry informationi

Entry nameiB1N0C6_LEUCK
AccessioniPrimary (citable) accession number: B1N0C6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: April 25, 2018
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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