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B1MY97 (B1MY97_LEUCK) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Histidine--tRNA ligase HAMAP-Rule MF_00127
EC=6.1.1.21 HAMAP-Rule MF_00127
Alternative name(s):
Histidyl-tRNA synthetase HAMAP-Rule MF_00127
Gene names
Name:hisS HAMAP-Rule MF_00127 EMBL ACA82499.1
Ordered Locus Names:LCK_00667 EMBL ACA82499.1
OrganismLeuconostoc citreum (strain KM20) [Complete proteome] [HAMAP] EMBL ACA82499.1
Taxonomic identifier349519 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Leuconostoc ›

Protein attributes

Sequence length434 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His). HAMAP-Rule MF_00127 SAAS SAAS015807

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00127

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00127.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00127 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
B1MY97 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 58B03FFB251F21CD

FASTA43448,265
        10         20         30         40         50         60 
MAKPTFQKPK GTADLLPEQT AQWQHIESIA RLLFGDYNFR EIRTPLFENF DVFSRSAGDT 

        70         80         90        100        110        120 
SDVVTKEMYD FHDKGNRHIA LRPEGTAGVV RAYVENKLYG PEFDKPYKAF YIGPMFRYER 

       130        140        150        160        170        180 
PQAGRFRQFH QIGVEAFGAT APALDVEIIA MAVDFFQTLG LKNLKVAINT LGDQASREAY 

       190        200        210        220        230        240 
RKALIAYLKP HFDELSPDSQ ARLEKNPLRV LDSKDPRDQV FVEDAPSILD FLSDDSSQHW 

       250        260        270        280        290        300 
QTVQELLTAL DITFEVDSTM VRGLDYYNDT IFEIMTVDDS LKGAATIAGG GRYSGLVAEF 

       310        320        330        340        350        360 
GGPETPGVGF GIGVERLISL LATQGVAPVK DDGLDFYVVN IGTSTNVVAT QIVQAIRSFG 

       370        380        390        400        410        420 
YVAERDYLGR SAKSQFKSAD RHHSRYVVTV GETELANHVV NIKNMATGMQ QTVKLADLYT 

       430 
DLPTIIDSQG DEAQ

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References

[1]"Complete genome sequence of Leuconostoc citreum KM20."
Kim J.F., Jeong H., Lee J.S., Choi S.H., Ha M., Hur C.G., Kim J.S., Lee S., Park H.S., Park Y.H., Oh T.K.
J. Bacteriol. 190:3093-3094(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KM20 EMBL ACA82499.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DQ489736 Genomic DNA. Translation: ACA82499.1.
RefSeqYP_001727943.1. NC_010471.1.

3D structure databases

ProteinModelPortalB1MY97.
ModBaseSearch...

Protein-protein interaction databases

STRING349519.LCK_00667.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA82499; ACA82499; LCK_00667.
GeneID6064030.
KEGGlci:LCK_00667.
PATRIC32614621. VBILeuCit37309_0791.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0124.
HOGENOMHOG000018072.
KOK01892.
OMACGGGNFK.
ProtClustDBCLSK2318997.

Enzyme and pathway databases

BioCycLCIT349519:GHNF-691-MONOMER.

Family and domain databases

Gene3D3.40.50.800. 1 hit.
HAMAPMF_00127. His_tRNA_synth.
InterProIPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR015807. His-tRNA-ligase.
IPR004516. HisRS/HisZ.
[Graphical view]
PANTHERPTHR11476. PTHR11476. 1 hit.
PfamPF03129. HGTP_anticodon. 1 hit.
[Graphical view]
PIRSFPIRSF001549. His-tRNA_synth. 1 hit.
SUPFAMSSF52954. Anticodon_bd. 1 hit.
TIGRFAMsTIGR00442. hisS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1MY97_LEUCK
AccessionPrimary (citable) accession number: B1MY97
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info