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B1MW85

- ATPB_LEUCK

UniProt

B1MW85 - ATPB_LEUCK

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Protein

ATP synthase subunit beta

Gene

atpD

Organism
Leuconostoc citreum (strain KM20)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.UniRule annotation

Catalytic activityi

ATP + H2O + H+(In) = ADP + phosphate + H+(Out).UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi153 – 1608ATPUniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-HAMAP
  2. proton-transporting ATP synthase activity, rotational mechanism Source: UniProtKB-HAMAP

GO - Biological processi

  1. ATP hydrolysis coupled proton transport Source: InterPro
  2. plasma membrane ATP synthesis coupled proton transport Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

ATP synthesis, Hydrogen ion transport, Ion transport, Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciLCIT349519:GHNF-1679-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
ATP synthase subunit betaUniRule annotation (EC:3.6.3.14UniRule annotation)
Alternative name(s):
ATP synthase F1 sector subunit betaUniRule annotation
F-ATPase subunit betaUniRule annotation
Gene namesi
Name:atpDUniRule annotation
Ordered Locus Names:LCK_01627
OrganismiLeuconostoc citreum (strain KM20)
Taxonomic identifieri349519 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeLeuconostoc
ProteomesiUP000002166: Chromosome

Subcellular locationi

Cell membrane UniRule annotation; Peripheral membrane protein UniRule annotation

GO - Cellular componenti

  1. plasma membrane Source: UniProtKB-HAMAP
  2. proton-transporting ATP synthase complex, catalytic core F(1) Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, CF(1), Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 466466ATP synthase subunit betaPRO_1000143522Add
BLAST

Proteomic databases

PRIDEiB1MW85.

Interactioni

Subunit structurei

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a1, b2 and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF1 is attached to CF0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

Protein-protein interaction databases

STRINGi349519.LCK_01627.

Structurei

3D structure databases

ProteinModelPortaliB1MW85.
SMRiB1MW85. Positions 1-465.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATPase alpha/beta chains family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0055.
HOGENOMiHOG000009605.
KOiK02112.
OMAiVVRGIHQ.
OrthoDBiEOG6HQSP3.

Family and domain databases

Gene3Di1.10.1140.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPiMF_01347. ATP_synth_beta_bact.
InterProiIPR003593. AAA+_ATPase.
IPR020003. ATPase_a/bsu_AS.
IPR005722. ATPase_F1-cplx_bsu.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR004100. ATPase_F1_a/bsu_N.
IPR024034. ATPase_F1_bsu/V1_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR15184:SF8. PTHR15184:SF8. 1 hit.
PfamiPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF47917. SSF47917. 1 hit.
SSF50615. SSF50615. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01039. atpD. 1 hit.
PROSITEiPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1MW85-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSTGKVVQVI GPVVDVAFES GQQVPDINNA LKIDKGDGQT LTVEVSLALG
60 70 80 90 100
DGIVRTIAMD STDGLQRGMS VTDTGDAIKV PVGEATLGRV FNVLGEPVDN
110 120 130 140 150
NGEIAAETPR HSIHRDAPSY DDLANSTEIL ETGIKVIDLL APYVRGGKIG
160 170 180 190 200
LFGGAGVGKT VLIQELIHNI AQGHNGISVF TGVGERTREG NDMYHEMAES
210 220 230 240 250
GVLKQTAMVY GQMNEPPGAR MRVALTGLTM AENFRDSEGK DVLLFIDNIF
260 270 280 290 300
RFTQAGSEVS ALLGRIPSAV GYQPTLATEM GQLQERITST KKGSVTSIQA
310 320 330 340 350
VYVPADDYTD PAPATTFAHL DATTNLERAL TQQGIYPAVD PLASTSSALD
360 370 380 390 400
PQVVGQEHYE VATEVQRTLQ RYRELQDIIS ILGMDELSDE EKTTVNRARR
410 420 430 440 450
IQFFLSQPFS VAETFTGING EYVPVAETVR SFKEILDGKY DDLPEDAFRN
460
VGAIEQVVEK AKTMAQ
Length:466
Mass (Da):50,267
Last modified:April 29, 2008 - v1
Checksum:iAD46BC8ADDC5D231
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ489736 Genomic DNA. Translation: ACA83450.1.
RefSeqiYP_001728894.1. NC_010471.1.

Genome annotation databases

EnsemblBacteriaiACA83450; ACA83450; LCK_01627.
GeneIDi6063606.
KEGGilci:LCK_01627.
PATRICi32616634. VBILeuCit37309_1761.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ489736 Genomic DNA. Translation: ACA83450.1 .
RefSeqi YP_001728894.1. NC_010471.1.

3D structure databases

ProteinModelPortali B1MW85.
SMRi B1MW85. Positions 1-465.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 349519.LCK_01627.

Proteomic databases

PRIDEi B1MW85.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA83450 ; ACA83450 ; LCK_01627 .
GeneIDi 6063606.
KEGGi lci:LCK_01627.
PATRICi 32616634. VBILeuCit37309_1761.

Phylogenomic databases

eggNOGi COG0055.
HOGENOMi HOG000009605.
KOi K02112.
OMAi VVRGIHQ.
OrthoDBi EOG6HQSP3.

Enzyme and pathway databases

BioCyci LCIT349519:GHNF-1679-MONOMER.

Family and domain databases

Gene3Di 1.10.1140.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPi MF_01347. ATP_synth_beta_bact.
InterProi IPR003593. AAA+_ATPase.
IPR020003. ATPase_a/bsu_AS.
IPR005722. ATPase_F1-cplx_bsu.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR004100. ATPase_F1_a/bsu_N.
IPR024034. ATPase_F1_bsu/V1_C.
IPR027417. P-loop_NTPase.
[Graphical view ]
PANTHERi PTHR15184:SF8. PTHR15184:SF8. 1 hit.
Pfami PF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view ]
SMARTi SM00382. AAA. 1 hit.
[Graphical view ]
SUPFAMi SSF47917. SSF47917. 1 hit.
SSF50615. SSF50615. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR01039. atpD. 1 hit.
PROSITEi PS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KM20.

Entry informationi

Entry nameiATPB_LEUCK
AccessioniPrimary (citable) accession number: B1MW85
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 29, 2008
Last modified: October 29, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3