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B1MW85 (ATPB_LEUCK) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ATP synthase subunit beta

EC=3.6.3.14
Alternative name(s):
ATP synthase F1 sector subunit beta
F-ATPase subunit beta
Gene names
Name:atpD
Ordered Locus Names:LCK_01627
OrganismLeuconostoc citreum (strain KM20) [Complete proteome] [HAMAP]
Taxonomic identifier349519 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeLeuconostoc

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits By similarity. HAMAP-Rule MF_01347

Catalytic activity

ATP + H2O + H+(In) = ADP + phosphate + H+(Out). HAMAP-Rule MF_01347

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a1, b2 and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF1 is attached to CF0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains By similarity.

Subcellular location

Cell membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_01347.

Sequence similarities

Belongs to the ATPase alpha/beta chains family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 466466ATP synthase subunit beta HAMAP-Rule MF_01347
PRO_1000143522

Regions

Nucleotide binding153 – 1608ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
B1MW85 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: AD46BC8ADDC5D231

FASTA46650,267
        10         20         30         40         50         60 
MSTGKVVQVI GPVVDVAFES GQQVPDINNA LKIDKGDGQT LTVEVSLALG DGIVRTIAMD 

        70         80         90        100        110        120 
STDGLQRGMS VTDTGDAIKV PVGEATLGRV FNVLGEPVDN NGEIAAETPR HSIHRDAPSY 

       130        140        150        160        170        180 
DDLANSTEIL ETGIKVIDLL APYVRGGKIG LFGGAGVGKT VLIQELIHNI AQGHNGISVF 

       190        200        210        220        230        240 
TGVGERTREG NDMYHEMAES GVLKQTAMVY GQMNEPPGAR MRVALTGLTM AENFRDSEGK 

       250        260        270        280        290        300 
DVLLFIDNIF RFTQAGSEVS ALLGRIPSAV GYQPTLATEM GQLQERITST KKGSVTSIQA 

       310        320        330        340        350        360 
VYVPADDYTD PAPATTFAHL DATTNLERAL TQQGIYPAVD PLASTSSALD PQVVGQEHYE 

       370        380        390        400        410        420 
VATEVQRTLQ RYRELQDIIS ILGMDELSDE EKTTVNRARR IQFFLSQPFS VAETFTGING 

       430        440        450        460 
EYVPVAETVR SFKEILDGKY DDLPEDAFRN VGAIEQVVEK AKTMAQ 

« Hide

References

[1]"Complete genome sequence of Leuconostoc citreum KM20."
Kim J.F., Jeong H., Lee J.-S., Choi S.-H., Ha M., Hur C.-G., Kim J.-S., Lee S., Park H.-S., Park Y.-H., Oh T.K.
J. Bacteriol. 190:3093-3094(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KM20.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DQ489736 Genomic DNA. Translation: ACA83450.1.
RefSeqYP_001728894.1. NC_010471.1.

3D structure databases

ProteinModelPortalB1MW85.
SMRB1MW85. Positions 1-465.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING349519.LCK_01627.

Proteomic databases

PRIDEB1MW85.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACA83450; ACA83450; LCK_01627.
GeneID6063606.
KEGGlci:LCK_01627.
PATRIC32616634. VBILeuCit37309_1761.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0055.
HOGENOMHOG000009605.
KOK02112.
OMAVVRGIHQ.
OrthoDBEOG6HQSP3.

Enzyme and pathway databases

BioCycLCIT349519:GHNF-1679-MONOMER.

Family and domain databases

Gene3D1.10.1140.10. 1 hit.
3.40.50.300. 1 hit.
HAMAPMF_01347. ATP_synth_beta_bact.
InterProIPR003593. AAA+_ATPase.
IPR020003. ATPase_a/bsu_AS.
IPR005722. ATPase_F1-cplx_bsu.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR004100. ATPase_F1_a/bsu_N.
IPR024034. ATPase_F1_bsu/V1_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERPTHR15184:SF8. PTHR15184:SF8. 1 hit.
PfamPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF47917. SSF47917. 1 hit.
SSF50615. SSF50615. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR01039. atpD. 1 hit.
PROSITEPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPB_LEUCK
AccessionPrimary (citable) accession number: B1MW85
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: April 29, 2008
Last modified: July 9, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families