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B1MW85

- ATPB_LEUCK

UniProt

B1MW85 - ATPB_LEUCK

Protein

ATP synthase subunit beta

Gene

atpD

Organism
Leuconostoc citreum (strain KM20)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (29 Apr 2008)
      Previous versions | rss
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    Functioni

    Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.UniRule annotation

    Catalytic activityi

    ATP + H2O + H+(In) = ADP + phosphate + H+(Out).UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi153 – 1608ATPUniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-HAMAP
    2. proton-transporting ATP synthase activity, rotational mechanism Source: UniProtKB-HAMAP

    GO - Biological processi

    1. ATP hydrolysis coupled proton transport Source: InterPro
    2. plasma membrane ATP synthesis coupled proton transport Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    ATP synthesis, Hydrogen ion transport, Ion transport, Transport

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciLCIT349519:GHNF-1679-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    ATP synthase subunit betaUniRule annotation (EC:3.6.3.14UniRule annotation)
    Alternative name(s):
    ATP synthase F1 sector subunit betaUniRule annotation
    F-ATPase subunit betaUniRule annotation
    Gene namesi
    Name:atpDUniRule annotation
    Ordered Locus Names:LCK_01627
    OrganismiLeuconostoc citreum (strain KM20)
    Taxonomic identifieri349519 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeLeuconostoc
    ProteomesiUP000002166: Chromosome

    Subcellular locationi

    Cell membrane UniRule annotation; Peripheral membrane protein UniRule annotation

    GO - Cellular componenti

    1. plasma membrane Source: UniProtKB-SubCell
    2. proton-transporting ATP synthase complex, catalytic core F(1) Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell membrane, CF(1), Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 466466ATP synthase subunit betaPRO_1000143522Add
    BLAST

    Proteomic databases

    PRIDEiB1MW85.

    Interactioni

    Subunit structurei

    F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a1, b2 and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF1 is attached to CF0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

    Protein-protein interaction databases

    STRINGi349519.LCK_01627.

    Structurei

    3D structure databases

    ProteinModelPortaliB1MW85.
    SMRiB1MW85. Positions 1-465.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATPase alpha/beta chains family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0055.
    HOGENOMiHOG000009605.
    KOiK02112.
    OMAiVVRGIHQ.
    OrthoDBiEOG6HQSP3.

    Family and domain databases

    Gene3Di1.10.1140.10. 1 hit.
    3.40.50.300. 1 hit.
    HAMAPiMF_01347. ATP_synth_beta_bact.
    InterProiIPR003593. AAA+_ATPase.
    IPR020003. ATPase_a/bsu_AS.
    IPR005722. ATPase_F1-cplx_bsu.
    IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
    IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
    IPR004100. ATPase_F1_a/bsu_N.
    IPR024034. ATPase_F1_bsu/V1_C.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PANTHERiPTHR15184:SF8. PTHR15184:SF8. 1 hit.
    PfamiPF00006. ATP-synt_ab. 1 hit.
    PF00306. ATP-synt_ab_C. 1 hit.
    PF02874. ATP-synt_ab_N. 1 hit.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF47917. SSF47917. 1 hit.
    SSF50615. SSF50615. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR01039. atpD. 1 hit.
    PROSITEiPS00152. ATPASE_ALPHA_BETA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B1MW85-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSTGKVVQVI GPVVDVAFES GQQVPDINNA LKIDKGDGQT LTVEVSLALG    50
    DGIVRTIAMD STDGLQRGMS VTDTGDAIKV PVGEATLGRV FNVLGEPVDN 100
    NGEIAAETPR HSIHRDAPSY DDLANSTEIL ETGIKVIDLL APYVRGGKIG 150
    LFGGAGVGKT VLIQELIHNI AQGHNGISVF TGVGERTREG NDMYHEMAES 200
    GVLKQTAMVY GQMNEPPGAR MRVALTGLTM AENFRDSEGK DVLLFIDNIF 250
    RFTQAGSEVS ALLGRIPSAV GYQPTLATEM GQLQERITST KKGSVTSIQA 300
    VYVPADDYTD PAPATTFAHL DATTNLERAL TQQGIYPAVD PLASTSSALD 350
    PQVVGQEHYE VATEVQRTLQ RYRELQDIIS ILGMDELSDE EKTTVNRARR 400
    IQFFLSQPFS VAETFTGING EYVPVAETVR SFKEILDGKY DDLPEDAFRN 450
    VGAIEQVVEK AKTMAQ 466
    Length:466
    Mass (Da):50,267
    Last modified:April 29, 2008 - v1
    Checksum:iAD46BC8ADDC5D231
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ489736 Genomic DNA. Translation: ACA83450.1.
    RefSeqiYP_001728894.1. NC_010471.1.

    Genome annotation databases

    EnsemblBacteriaiACA83450; ACA83450; LCK_01627.
    GeneIDi6063606.
    KEGGilci:LCK_01627.
    PATRICi32616634. VBILeuCit37309_1761.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ489736 Genomic DNA. Translation: ACA83450.1 .
    RefSeqi YP_001728894.1. NC_010471.1.

    3D structure databases

    ProteinModelPortali B1MW85.
    SMRi B1MW85. Positions 1-465.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 349519.LCK_01627.

    Proteomic databases

    PRIDEi B1MW85.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACA83450 ; ACA83450 ; LCK_01627 .
    GeneIDi 6063606.
    KEGGi lci:LCK_01627.
    PATRICi 32616634. VBILeuCit37309_1761.

    Phylogenomic databases

    eggNOGi COG0055.
    HOGENOMi HOG000009605.
    KOi K02112.
    OMAi VVRGIHQ.
    OrthoDBi EOG6HQSP3.

    Enzyme and pathway databases

    BioCyci LCIT349519:GHNF-1679-MONOMER.

    Family and domain databases

    Gene3Di 1.10.1140.10. 1 hit.
    3.40.50.300. 1 hit.
    HAMAPi MF_01347. ATP_synth_beta_bact.
    InterProi IPR003593. AAA+_ATPase.
    IPR020003. ATPase_a/bsu_AS.
    IPR005722. ATPase_F1-cplx_bsu.
    IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
    IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
    IPR004100. ATPase_F1_a/bsu_N.
    IPR024034. ATPase_F1_bsu/V1_C.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    PANTHERi PTHR15184:SF8. PTHR15184:SF8. 1 hit.
    Pfami PF00006. ATP-synt_ab. 1 hit.
    PF00306. ATP-synt_ab_C. 1 hit.
    PF02874. ATP-synt_ab_N. 1 hit.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47917. SSF47917. 1 hit.
    SSF50615. SSF50615. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR01039. atpD. 1 hit.
    PROSITEi PS00152. ATPASE_ALPHA_BETA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KM20.

    Entry informationi

    Entry nameiATPB_LEUCK
    AccessioniPrimary (citable) accession number: B1MW85
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: April 29, 2008
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3