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Protein
Submitted name:

Chromosome, complete sequence

Gene

MAB_4207

Organism
Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMABS36809-WGS:GSQO-4226-MONOMER.
MABS561007:GJTG-4226-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome, complete sequenceImported
Gene namesi
Ordered Locus Names:MAB_4207Imported
OrganismiMycobacterium abscessus (strain ATCC 19977 / DSM 44196)Imported
Taxonomic identifieri561007 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium abscessus
ProteomesiUP000007137 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi561007.MAB_4207.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4FFCX-ray1.80A/B/C/D1-449[»]
ProteinModelPortaliB1MIQ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
OMAiTGYSHPK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1MIQ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDITYRLAQ KRTIVTPLPG PRSGALAERR RAAVSAGVGS TAPVYAVDAD
60 70 80 90 100
GGVIVDADGN SFIDLGAGIA VTTVGASHPA VAAAIADQAT HFTHTCFMVT
110 120 130 140 150
PYEGYVQVAE LLNALTPGDH DKRTALFNSG AEAVENAIKV ARLATGRPAV
160 170 180 190 200
VAFDNAYHGR TNLTMALTAK SMPYKSQFGP FAPEVYRMPA SYPLRDEPGL
210 220 230 240 250
TGEEAARRAI SRIETQIGAQ SLAAIIIEPI QGEGGFIVPA PGFLATLTAW
260 270 280 290 300
ASENGVVFIA DEVQTGFART GAWFASEHEG IVPDIVTMAK GIAGGMPLSA
310 320 330 340 350
VTGRAELMDA VYAGGLGGTY GGNPVTCAAA VAALGVMREL DLPARARAIE
360 370 380 390 400
ASVTSRLSAL AEEVDIIGEV RGRGAMLAIE IVKPGTLEPD AALTKSIAAE
410 420 430 440
ALSQGVLILT CGTFGNVIRL LPPLVIGDDL LDEGITALSD IIRAKASHQ
Length:449
Mass (Da):46,413
Last modified:April 29, 2008 - v1
Checksum:i83EC8057A80BF883
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU458896 Genomic DNA. Translation: CAM64280.1.

Genome annotation databases

EnsemblBacteriaiCAM64280; CAM64280; MAB_4207.
PATRICi17980240. VBIMycAbs55940_4285.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU458896 Genomic DNA. Translation: CAM64280.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4FFCX-ray1.80A/B/C/D1-449[»]
ProteinModelPortaliB1MIQ9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi561007.MAB_4207.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAM64280; CAM64280; MAB_4207.
PATRICi17980240. VBIMycAbs55940_4285.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
OMAiTGYSHPK.

Enzyme and pathway databases

BioCyciMABS36809-WGS:GSQO-4226-MONOMER.
MABS561007:GJTG-4226-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Acquisition of foreign virulence genes by the cystic fibrosis pathogen Mycobacterium abscessus."
    Genoscope
    Ripoll F., Pasek S., Schenowitz C., Dossat C., Barbe V., Rottman M., Heym B., Herrmann J.L., Daffe M., Brosch R., Risler J.L., Gaillard J.L.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19977 / DSM 44196Imported.
  2. Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).

Entry informationi

Entry nameiB1MIQ9_MYCA9
AccessioniPrimary (citable) accession number: B1MIQ9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 27, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.