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B1MFF5 (B1MFF5_MYCA9) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length411 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the acyl-CoA dehydrogenase family. RuleBase RU004309

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding142 – 1454FAD PDB 4HR3
Nucleotide binding151 – 1522FAD PDB 4HR3
Nucleotide binding176 – 1783FAD PDB 4HR3
Nucleotide binding303 – 3064FAD PDB 4HR3
Nucleotide binding363 – 3675FAD PDB 4HR3

Sites

Binding site2931FAD PDB 4HR3
Binding site3941FAD PDB 4HR3

Sequences

Sequence LengthMass (Da)Tools
B1MFF5 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: E4427C19EE8BF0E9

FASTA41144,185
        10         20         30         40         50         60 
MDFAPSARAA ELIAAVREFI DAEVMPVERA VLAHHDELLG ARAGTTAELW HVPPELDSLK 

        70         80         90        100        110        120 
AKARAAGLWN LFLPDPELGG GLSNSEYAPL AEQMGRSLFA PTVFNCNAPD SGNMEVLHRY 

       130        140        150        160        170        180 
GSQEQKEVWL EPLLEGDIRS AFCMTEPDVA SSDATNMAAT AVVEGDEVVI NGRKWWSTGV 

       190        200        210        220        230        240 
GHPDCKVIIF MGLTDPNAHR YARHSMVLVP MDTPGITVER MLPTMGFYDE PGGHGVVSFD 

       250        260        270        280        290        300 
NVRLPADAFI AGPGKGFEIA QGRLGPGRVH HAMRLIGLAE VALEHACRRG LDRTAFGKPL 

       310        320        330        340        350        360 
VNLGGNRERI ADARIAINQT RLLVLHAAWL LDTVGIMGAL SAVSEIKVAA PNMAQQVIDM 

       370        380        390        400        410 
AIQIHGGGGL SNDFPLAAAW VNARALRLAD GPDEVHRGVV ARIELAKYAN D 

« Hide

References

« Hide 'large scale' references
[1]"Acquisition of foreign virulence genes by the cystic fibrosis pathogen Mycobacterium abscessus."
Genoscope
Ripoll F., Pasek S., Schenowitz C., Dossat C., Barbe V., Rottman M., Heym B., Herrmann J.L., Daffe M., Brosch R., Risler J.L., Gaillard J.L.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19977 / DSM 44196.
[2]"Structure of a putative acyl-CoA dehydrogenase from Mycobacterium abscessus."
Clifton M.C., Davies D.
Submitted (OCT-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH FAD.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU458896 Genomic DNA. Translation: CAM60355.1.
RefSeqYP_001701009.1. NC_010397.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4HR3X-ray1.80A1-411[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING561007.MAB_0255.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAM60355; CAM60355; MAB_0255.
GeneID5962798.
KEGGmab:MAB_0255.
PATRIC17972155. VBIMycAbs55940_0285.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1960.
HOGENOMHOG000131660.
OMAPDEVHRG.
OrthoDBEOG6H1PWC.
ProtClustDBCLSK2316337.

Enzyme and pathway databases

BioCycMABS561007:GJTG-258-MONOMER.

Family and domain databases

Gene3D1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProIPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view]
PfamPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMSSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1MFF5_MYCA9
AccessionPrimary (citable) accession number: B1MFF5
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 11, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)