Putative acyl-CoA dehydrogenase - Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)

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B1MFF5 (B1MFF5_MYCA9) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 35. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative acyl-CoA dehydrogenase EMBL CAM60355.1

Gene names

Ordered Locus Names:

MAB_0255 EMBL CAM60355.1

Organism

Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium abscessus

Protein attributes

Sequence length	411 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the acyl-CoA dehydrogenase family. RuleBase RU004309

Ontologies

Keywords
Ligand	FAD RuleBase RU003714 Flavoprotein RuleBase RU003714
Molecular function	Oxidoreductase RuleBase RU003714
Technical term	3D-structure PDB 4HR3 Complete proteome
Gene Ontology (GO)
Molecular_function	acyl-CoA dehydrogenase activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

B1MFF5 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: E4427C19EE8BF0E9
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411

44,185

        10         20         30         40         50         60 
MDFAPSARAA ELIAAVREFI DAEVMPVERA VLAHHDELLG ARAGTTAELW HVPPELDSLK 

        70         80         90        100        110        120 
AKARAAGLWN LFLPDPELGG GLSNSEYAPL AEQMGRSLFA PTVFNCNAPD SGNMEVLHRY 

       130        140        150        160        170        180 
GSQEQKEVWL EPLLEGDIRS AFCMTEPDVA SSDATNMAAT AVVEGDEVVI NGRKWWSTGV 

       190        200        210        220        230        240 
GHPDCKVIIF MGLTDPNAHR YARHSMVLVP MDTPGITVER MLPTMGFYDE PGGHGVVSFD 

       250        260        270        280        290        300 
NVRLPADAFI AGPGKGFEIA QGRLGPGRVH HAMRLIGLAE VALEHACRRG LDRTAFGKPL 

       310        320        330        340        350        360 
VNLGGNRERI ADARIAINQT RLLVLHAAWL LDTVGIMGAL SAVSEIKVAA PNMAQQVIDM 

       370        380        390        400        410 
AIQIHGGGGL SNDFPLAAAW VNARALRLAD GPDEVHRGVV ARIELAKYAN D

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Acquisition of foreign virulence genes by the cystic fibrosis pathogen Mycobacterium abscessus." Genoscope Ripoll F., Pasek S., Schenowitz C., Dossat C., Barbe V., Rottman M., Heym B., Herrmann J.L., Daffe M., Brosch R., Risler J.L., Gaillard J.L. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19977 / DSM 44196.
[2]	"Structure of a putative acyl-CoA dehydrogenase from Mycobacterium abscessus." Clifton M.C., Davies D. Submitted (OCT-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CU458896 Genomic DNA. Translation: CAM60355.1.

RefSeq

YP_001701009.1. NC_010397.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4HR3	X-ray	1.80	A	1-411	[»]

ModBase

Protein-protein interaction databases

STRING

561007.MAB_0255.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

CAM60355; CAM60355; MAB_0255.

KEGG

PATRIC

17972155. VBIMycAbs55940_0285.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

HOGENOM

OMA

ProtClustDB

Enzyme and pathway databases

BioCyc

MABS561007:GJTG-258-MONOMER.

Family and domain databases

Gene3D

1.10.540.10. 1 hit.
2.40.110.10. 1 hit.

InterPro

IPR006092. Acyl-CoA_DH_N.
IPR006090. Acyl-CoA_Oxase/DH_1.
IPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase.
[Graphical view]

Pfam

PF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]

SUPFAM

SSF56645. AcylCoA_dehyd_NM. 1 hit.
SSF47203. AcylCoADH_C_like. 1 hit.

ProtoNet

Entry information

Entry name

B1MFF5_MYCA9

Accession

Primary (citable) accession number: B1MFF5

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	May 29, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info