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Protein
Submitted name:

Chromosome, complete sequence

Gene

MAB_0255

Organism
Mycobacterium abscessus (strain ATCC 19977 / DSM 44196)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei293 – 2931FADCombined sources
Binding sitei394 – 3941FADCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi142 – 1454FADCombined sources
Nucleotide bindingi151 – 1522FADCombined sources
Nucleotide bindingi176 – 1783FADCombined sources
Nucleotide bindingi303 – 3064FADCombined sources
Nucleotide bindingi363 – 3675FADCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

FADUniRule annotationCombined sources, Flavoprotein, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciMABS36809-WGS:GSQO-258-MONOMER.
MABS561007:GJTG-258-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome, complete sequenceImported
Gene namesi
Ordered Locus Names:MAB_0255Imported
OrganismiMycobacterium abscessus (strain ATCC 19977 / DSM 44196)Imported
Taxonomic identifieri561007 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium abscessus
ProteomesiUP000007137 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi561007.MAB_0255.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4HR3X-ray1.80A1-411[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the acyl-CoA dehydrogenase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1960.
HOGENOMiHOG000131660.
OMAiGLGHPNA.
OrthoDBiEOG6H1PWC.

Family and domain databases

Gene3Di1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProiIPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view]
PfamiPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMiSSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.

Sequencei

Sequence statusi: Complete.

B1MFF5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFAPSARAA ELIAAVREFI DAEVMPVERA VLAHHDELLG ARAGTTAELW
60 70 80 90 100
HVPPELDSLK AKARAAGLWN LFLPDPELGG GLSNSEYAPL AEQMGRSLFA
110 120 130 140 150
PTVFNCNAPD SGNMEVLHRY GSQEQKEVWL EPLLEGDIRS AFCMTEPDVA
160 170 180 190 200
SSDATNMAAT AVVEGDEVVI NGRKWWSTGV GHPDCKVIIF MGLTDPNAHR
210 220 230 240 250
YARHSMVLVP MDTPGITVER MLPTMGFYDE PGGHGVVSFD NVRLPADAFI
260 270 280 290 300
AGPGKGFEIA QGRLGPGRVH HAMRLIGLAE VALEHACRRG LDRTAFGKPL
310 320 330 340 350
VNLGGNRERI ADARIAINQT RLLVLHAAWL LDTVGIMGAL SAVSEIKVAA
360 370 380 390 400
PNMAQQVIDM AIQIHGGGGL SNDFPLAAAW VNARALRLAD GPDEVHRGVV
410
ARIELAKYAN D
Length:411
Mass (Da):44,185
Last modified:April 29, 2008 - v1
Checksum:iE4427C19EE8BF0E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU458896 Genomic DNA. Translation: CAM60355.1.

Genome annotation databases

EnsemblBacteriaiCAM60355; CAM60355; MAB_0255.
PATRICi17972155. VBIMycAbs55940_0285.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU458896 Genomic DNA. Translation: CAM60355.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4HR3X-ray1.80A1-411[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi561007.MAB_0255.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAM60355; CAM60355; MAB_0255.
PATRICi17972155. VBIMycAbs55940_0285.

Phylogenomic databases

eggNOGiCOG1960.
HOGENOMiHOG000131660.
OMAiGLGHPNA.
OrthoDBiEOG6H1PWC.

Enzyme and pathway databases

BioCyciMABS36809-WGS:GSQO-258-MONOMER.
MABS561007:GJTG-258-MONOMER.

Family and domain databases

Gene3Di1.10.540.10. 1 hit.
2.40.110.10. 1 hit.
InterProiIPR006091. Acyl-CoA_Oxase/DH_cen-dom.
IPR009075. AcylCo_DH/oxidase_C.
IPR013786. AcylCoA_DH/ox_N.
IPR009100. AcylCoA_DH/oxidase_NM_dom.
[Graphical view]
PfamiPF00441. Acyl-CoA_dh_1. 1 hit.
PF02770. Acyl-CoA_dh_M. 1 hit.
PF02771. Acyl-CoA_dh_N. 1 hit.
[Graphical view]
SUPFAMiSSF47203. SSF47203. 1 hit.
SSF56645. SSF56645. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Acquisition of foreign virulence genes by the cystic fibrosis pathogen Mycobacterium abscessus."
    Genoscope
    Ripoll F., Pasek S., Schenowitz C., Dossat C., Barbe V., Rottman M., Heym B., Herrmann J.L., Daffe M., Brosch R., Risler J.L., Gaillard J.L.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19977 / DSM 44196Imported.
  2. Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH FAD.

Entry informationi

Entry nameiB1MFF5_MYCA9
AccessioniPrimary (citable) accession number: B1MFF5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: June 24, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.