B1MDF2 (RS2_MYCA9) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S2

Gene names

Name:	rpsB
Ordered Locus Names:	MAB_3196c

Organism

Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) [Complete proteome] [HAMAP]

Taxonomic identifier

561007 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium abscessus

Protein attributes

Sequence length	277 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 277	277	30S ribosomal protein S2 HAMAP MF_00291_B		PRO_1000115035

Sequences

	Sequence		Length	Mass (Da)
	B1MDF2 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 89C2A52C213AB7DE	FASTA	277	30,459
	10 20 30 40 50 60 MAVVTMKQLL DSGAHFGHQT RRWNPKMKRF IFTDRNGIYI IDLQQTLTYI DKAYEFVKET 70 80 90 100 110 120 VAHGGSVMFV GTKKQAQEPI AEEATRVGMP YVNQRWLGGM LTNFSTVHKR LQRLKELESM 130 140 150 160 170 180 EQTGGFEGRT KKEILMLTRE KNKLERSLGG IRDMQKVPSA IFVVDTNKEH LAVAEARKLN 190 200 210 220 230 240 IPIIAILDTN CDPDVVDYPI PGNDDAIRSA ALLTKVVASA IAEGLQARSG LAGGDEKPEA 250 260 270 GEPLAEWEQE LLASAVATTD EASAPSAAAT ETTTEEG

References

[1]

"Acquisition of foreign virulence genes by the cystic fibrosis pathogen Mycobacterium abscessus." Genoscope Ripoll F., Pasek S., Schenowitz C., Dossat C., Barbe V., Rottman M., Heym B., Herrmann J.L., Daffe M., Brosch R., Risler J.L., Gaillard J.L. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19977 / DSM 44196.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU458896 Genomic DNA. Translation: CAM63273.1.
RefSeq	YP_001703927.1. NC_010397.1.
3D structure databases
ProteinModelPortal	B1MDF2.
SMR	B1MDF2. Positions 6-228.
ModBase	Search...
Protein-protein interaction databases
STRING	B1MDF2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBMYCT00000008419; EBMYCP00000008358; EBMYCG00000008417.
GeneID	5965701.
GenomeReviews	Gene locus MAB_3196c in contig CU458896_GR.
KEGG	mab:MAB_3196c.
PATRIC	17978162. VBIMycAbs55940_3254.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000017722.
HOGENOM	HBG736296.
OMA	KQAQDSV.
Enzyme and pathway databases
BioCyc	MABS561007:MAB_3196C-MONOMER.
Family and domain databases
HAMAP	MF_00291_B. Ribosomal_S2_B. [Tree]
InterPro	IPR001865. Ribosomal_S2. IPR005706. Ribosomal_S2_bac/mit/plastid. IPR018130. Ribosomal_S2_CS. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02967.
PANTHER	PTHR12534. Ribosom_S2_bac. 1 hit.
Pfam	PF00318. Ribosomal_S2. 1 hit. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01011. RpsB_bact. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. PS00963. RIBOSOMAL_S2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS2_MYCA9

Accession

Primary (citable) accession number: B1MDF2

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 24, 2009
Last sequence update:	April 29, 2008
Last modified:	January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program