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B1M6D3 (B1M6D3_METRJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1092 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1M6D3 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 912643A915E6955A

FASTA1,092122,781
        10         20         30         40         50         60 
MIDRSDPQWY RDAIIYQIHV KSFFDSNNDG IGDFVGLTQR LDYVRDLGVT AIWLMPFYPS 

        70         80         90        100        110        120 
PLRDDGYDIA DYRDINPSYG TMEDFKAFVE AAHERGLRVI TELVINHTSD QHPWFQAARE 

       130        140        150        160        170        180 
APPGSPERNF YVWSDTDEPY KDTRIIFLDT EASNWTWDPV AKQYFWHRFY SHQPDLNFDN 

       190        200        210        220        230        240 
PAVLEAVIEV MRYWLDMGVD GLRLDAIPYL IERDGTNCEN LAETHEVIKK IRAALDAEYP 

       250        260        270        280        290        300 
DRMLLAEANQ WPEETAQYFG DGDECHMAFH FPLMPRMYMA IAREDRHPIT DIMRQTPEIP 

       310        320        330        340        350        360 
EGCQWAIFLR NHDELTLEMV TAEERDYLWS FYAAERRARI NLGIRRRLAP LLENDRRKIE 

       370        380        390        400        410        420 
LMKSLVLSMP GTPVLYYGDE VGMGDNIYLG DRDGVRTPMQ WSPDRNGGFS RANPQKLFLP 

       430        440        450        460        470        480 
AIQDPIYGFD AINVEAQTQA QTSLLNWTRR MIAIRNNSVA LGRGTIQFLY PSNRKVLAWI 

       490        500        510        520        530        540 
REHEDERILC VANLSRAPQA VQLDLSELRT AVPIELTGGT EFPPIGDLPY LLTLPSYGFY 

       550        560        570        580        590        600 
WFSLSAARSG VVGPQQEPPE LFTLVLTGGI ETLMSGRERV AFERTVVPPF LTSRRWFGAK 

       610        620        630        640        650        660 
GSRIKATKVV DCAALKDVDG SARFLLPRLQ VQLASGETQE YFVPVGVEEG REDETLMPFA 

       670        680        690        700        710        720 
VARVRRGPRT GLLYGAAGSN DFAACLIDDM RQAREIPTET GRLVFAVTSA FDPDVTVDVA 

       730        740        750        760        770        780 
DIRRLSGEQS NTSIAIGSKM MLKLLRRLQP GLHPEIEVGR FLTEQAGFSN TPALLGTLEH 

       790        800        810        820        830        840 
VAEDGTRTAL AVLQKFVMNQ GDAWTLMLEG LRRDFETVVL TPESEAATPE EAFQAHRPWA 

       850        860        870        880        890        900 
DLLGRRTAEL HAALAIETDD PAFAAEPFTG DDLAVLARDA RHQAERAFRA LKGLADRGLD 

       910        920        930        940        950        960 
AGKPACAELG RRRGEVEALI GSLTAAPVRG AHKTRIHGDY HLGQVLVAEN DLIIVDFEGE 

       970        980        990       1000       1010       1020 
PSRPADERRA KSMPLRDVAG LMRSFAYGAE TVIREITARF ADSEERARDA ATAWRGMIEA 

      1030       1040       1050       1060       1070       1080 
AFLAGYETAV EGSRAAVTDA DSRARLLRLC LLTKALYEVD YEANNRPDWI EIPARGVLTI 

      1090 
LDTDGHEPGA SE 

« Hide

References

[1]"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C.J., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001001 Genomic DNA. Translation: ACB23593.1.
RefSeqYP_001754276.1. NC_010505.1.

3D structure databases

ProteinModelPortalB1M6D3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING426355.Mrad2831_1598.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB23593; ACB23593; Mrad2831_1598.
GeneID6137626.
KEGGmrd:Mrad2831_1598.
PATRIC22571474. VBIMetRad70578_1636.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycMRAD426355:GJB5-1616-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1M6D3_METRJ
AccessionPrimary (citable) accession number: B1M6D3
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: May 14, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)