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B1M6D1 (B1M6D1_METRJ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycogen synthase HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484
Alternative name(s):
Starch [bacterial glycogen] synthase HAMAP MF_00484
Gene names
Name:glgA HAMAP MF_00484
Ordered Locus Names:Mrad2831_1596
OrganismMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) [Complete proteome] [HAMAP]
Taxonomic identifier426355 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length512 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
   Biological processGlycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
   Molecular functionGlycosyltransferase HAMAP MF_00484 SAAS SAAS011835
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycogen biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Molecular functionstarch synthase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Binding site491ADP-glucose By similarity HAMAP MF_00484

Sequences

Sequence LengthMass (Da)Tools
B1M6D1 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 77ECA1E440F877AF

FASTA51255,235
        10         20         30         40         50         60 
MLDARRGGSF AEWSSGEGNG AGPVPVPARP ASLRRRILYA TPEMADFVKT GGLGEVSAAL 

        70         80         90        100        110        120 
PRALVPHYDI RVLIPGYRQV RAAFPEIPVV ARLEGFAGIP ACDLGLVEAA DGLRIYVLLS 

       130        140        150        160        170        180 
PDLYERDGTP YGDQHGDFGD NDLRFARLSL AAADLATGAD PDWAADLLHL NDWQAALAPA 

       190        200        210        220        230        240 
YLAWRGRRVP SVLTIHNLAY QGLFPRDALP RLGVPDAAFQ VDGAEFYGQL SFLKAGIFYA 

       250        260        270        280        290        300 
SQVTTVSETY AREIQTPELG CGLDGLLRTR AGQGRLAGIL NGIDETWDPT TDPHLATRFE 

       310        320        330        340        350        360 
IDDWKGKRAN AEAVRRQFGL AVSRGPLFAI VSRLVHQKGI DLSLQAAETI VAGGGQLVVI 

       370        380        390        400        410        420 
GQGEGRFEQA LRGLAKRHPD AVGVHVGFEE AQARRMFAGS DFLLMPSRFE PCGLAQMYAQ 

       430        440        450        460        470        480 
RFGSLPIVRR TGGLADTVED GVTGFTFGEA SAASFGAAVR RALEAFGQKK RLNAMRRRAM 

       490        500        510 
TARFGWDQAA DNYAGLYGRA IGNSVGLRWR AA

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References

[1]"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C.J., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001001 Genomic DNA. Translation: ACB23591.1.
RefSeqYP_001754274.1. NC_010505.1.

3D structure databases

ProteinModelPortalB1M6D1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1M6D1.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6137624.
GenomeReviewsGene locus Mrad2831_1596 in contig CP001001_GR.
KEGGmrd:Mrad2831_1596.
PATRIC22571470. VBIMetRad70578_1634.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG596384.
OMAHAHDWPA.
ProtClustDBPRK00654.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
[Tree]
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
KOK00703.
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. GlgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1M6D1_METRJ
AccessionPrimary (citable) accession number: B1M6D1
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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