B1M428 (B1M428_METRJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exodeoxyribonuclease III Xth EMBL ACB24905.1

Gene names

Ordered Locus Names:

Mrad2831_2921 EMBL ACB24905.1

Organism

Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) [Complete proteome] [HAMAP] EMBL ACB24905.1

Taxonomic identifier

426355 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium radiotolerans

Protein attributes

Sequence length	264 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro endonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1M428 [UniParc]. Last modified April 29, 2008. Version 1. Checksum: 7086B82E275A39D1	FASTA	264	29,005
	10 20 30 40 50 60 MRITTWNVNS IKQRLPHLLG FLEEARPDVV CLQELKCQDE SFPRADIEAA GYAVETLGQK 70 80 90 100 110 120 AYNGVALLVR APLAMSKIRR GLPGDADDAQ ARYIEALISG ADTRPVRVAS IYLPNGNPVD 130 140 150 160 170 180 SPKYPYKLAF LERLRLHARA LLEDEIAVVL AGDYNVIPEA ADAADPEAWR SDALFLGTTR 190 200 210 220 230 240 AAFRAILAEG YTDALRACDP RDGLYTFWDY QAGCWQRNAG IRIDHLLLSP QAGDRLVSAS 250 260 VQKHLRGLDK PSDHVPVTAE LAAG

References

[1]

"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Marx C.J., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001001 Genomic DNA. Translation: ACB24905.1.
RefSeq	YP_001755588.1. NC_010505.1.
3D structure databases
ProteinModelPortal	B1M428.
ModBase	Search...
Protein-protein interaction databases
STRING	426355.Mrad2831_2921.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACB24905; ACB24905; Mrad2831_2921.
GeneID	6138965.
KEGG	mrd:Mrad2831_2921.
PATRIC	22574210. VBIMetRad70578_2988.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0708.
HOGENOM	HOG000034587.
KO	K01142.
OMA	KYPYKLA.
ProtClustDB	CLSK2330891.
Enzyme and pathway databases
BioCyc	MRAD426355:GJB5-2955-MONOMER.
Family and domain databases
Gene3D	3.60.10.10. 1 hit.
InterPro	IPR020847. AP_endonuclease_F1_BS. IPR020848. AP_endonuclease_F1_CS. IPR005135. Endo/exonuclease/phosphatase. IPR004808. ExoDNase_III. [Graphical view]
PANTHER	PTHR22748. PTHR22748. 1 hit.
Pfam	PF03372. Exo_endo_phos. 1 hit. [Graphical view]
SUPFAM	SSF56219. Exo_endo_phos. 1 hit.
TIGRFAMs	TIGR00633. xth. 1 hit.
PROSITE	PS00726. AP_NUCLEASE_F1_1. 1 hit. PS00728. AP_NUCLEASE_F1_3. 1 hit. PS51435. AP_NUCLEASE_F1_4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1M428_METRJ

Accession

Primary (citable) accession number: B1M428

Entry history

Integrated into UniProtKB/TrEMBL:	April 29, 2008
Last sequence update:	April 29, 2008
Last modified:	May 29, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)