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B1LZ28 (B1LZ28_METRJ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase 1 HAMAP MF_01201
EC=5.1.1.1 HAMAP MF_01201
Gene names
Name:alr1 HAMAP MF_01201
Ordered Locus Names:Mrad2831_3896
OrganismMethylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) [Complete proteome] [HAMAP]
Taxonomic identifier426355 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 RuleBase RU000608 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site451Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2601Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue451N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
B1LZ28 [UniParc].

Last modified April 29, 2008. Version 1.
Checksum: 70E4531C740F5A06

FASTA36436,942
        10         20         30         40         50         60 
MAETGPVTEI GAHGARLTID LGAIAANWRI LAARGAGADC AAVVKADAYG CGIGRVGPAL 

        70         80         90        100        110        120 
WAAGCRTFFV AHLSEGVAAR AALPEAAIYV LNGLPLGAAA AFAAHGLRPV LGSAEELSDW 

       130        140        150        160        170        180 
AAFAGNRPPA ALHVDTGMNR LGLSVPEALD LAGDARIAEA GIDLLLSHFV SAETPDDPVN 

       190        200        210        220        230        240 
ARQIADFARV RAAYPGLRAS LANSSGIFLD GARHDLLRPG YALFGGNPTP GAANPMRPVV 

       250        260        270        280        290        300 
RLEATIAQVR GVAAGATAGY NGRWTATAPS RLATLSLGYA DGFPRSISGR GQALVGGVPC 

       310        320        330        340        350        360 
PILGSVSMDL IILDVTAAPA ARRGAAAVLI GDRLDIDTVG RAAGTIGYEI LTGLGSRYVR 


TYVG

« Hide

References

[1]"Complete sequence of chromosome of Methylobacterium radiotolerans JCM 2831."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Marx C.J., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27329 / DSM 1819 / JCM 2831.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001001 Genomic DNA. Translation: ACB25870.1.
RefSeqYP_001756553.1. NC_010505.1.

3D structure databases

ProteinModelPortalB1LZ28.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1LZ28.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6139951.
GenomeReviewsGene locus Mrad2831_3896 in contig CP001001_GR.
KEGGmrd:Mrad2831_3896.
PATRIC22576228. VBIMetRad70578_3987.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG712172.
OMASMDLIIL.
ProtClustDBCLSK2331904.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1LZ28_METRJ
AccessionPrimary (citable) accession number: B1LZ28
Entry history
Integrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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